fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G26790 FUS3 FUSCA 3, AP2/B3-like transcriptional factor family protein (.1)

>AT3G26790.1 CDS map

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Uncut enzymes: Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BlpI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, , NarI, NcoI, NdeI, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AatII GACGT|C 298
AccI GT|[AC][TG]AC 595, 793
AccII(FnuDII) CG|CG 337
AciI C|CGC 234, 336
AluI AG|CT 258, 302, 507
AvaII G|G[AT]CC 418
BalI TGG|CCA 439
BamHI G|GATCC 67
BanII GPuGCPy|C 903
BclI T|GATCA 54, 84
BfaI C|TAG 147, 467, 509, 937
BglI GCCNNNN|NGGC 342
BglII A|GATCT 537
BsaAI PyAC|GTPu 217, 239, 463
BsaBI GATNN|NNATC 686
BsaHI GPu|CGPyC 102, 298
BsaJI C|CNNGG 26, 338
BslI CCNNNNN|NNGG 117
BsmI GAATGCN| 365, 493
Bsp1286I G[GAT]GC[CAT]|C 903
BspHI T|CATGA 81
BsrFI Pu|CCGGPy 354
BsrI ACTGGN| 128, 437
BssKI |CCNGG 70
BstF5I GGATGNN| 144
BstUI CG|CG 337
BstYI Pu|GATCPy 67, 537
BtgI C|CPuPyGG 338
Cac8I GCN|NGC 354
Cfr10I [AG]|CCGG[TC] 354
DdeI C|TNAG 261
DpnI GA-CH3|TC 53, 66, 83, 159, 536, 643, 665
DpnII |GATC 53, 66, 83, 159, 536, 643, 665
EaeI Py|GGCCPu 439
Fnu4HI GC|NGC 336, 506
HaeIII GG|CC 28, 438
HincII GTPy|PuAC 124, 661
HinfI G|ANTC 265, 377, 783
HpaI GTT|AAC 124, 661
HpaII C|CGG 69, 353
Hpy188I TCN|GA 310, 579, 883
Hpy99I CG[AT]CG| 312, 620, 802, 853
HpyCH4III ACN|GT 292, 403, 654
HpyCH4IV A|CGT 216, 238, 297, 313, 411, 462, 555, 597, 621
HpyCH4V TG|CA 365, 504
MboI |GATC 53, 66, 83, 159, 536, 643, 665
MscI TGG|CCA 439
MseI T|TAA 123, 174, 635, 660, 684
MslI CAPyNN|NNPuTG 363
MspA1I C[AC]G|C[GT]G 338
MspI C|CGG 69, 353
MwoI GCNNNNN|NNGC 342, 573
N.BstNBI GAGTCNNNN|N 788
NaeI GCC|GGC 354
NciI CC|[CG]GG 70
NgoMIV G|CCGGC 354
NlaIII CATG| 56, 80, 89, 497, 523
NlaIV GGN|NCC 67, 904
PmlI CAC|GTG 217
PstI CTGCA|G 505
RsaI GT|AC 433, 460
SacII CCGC|GG 338
Sau3AI |GATC 53, 66, 83, 159, 536, 643, 665
Sau96I G|GNCC 418
ScrFI CC|NGG 70
SfcI C|TPuPyAG 505
SmlI C|TPyPuAG 286
StuI AGG|CCT 29
StyI C|C[AT][AT]GG 26
Taqƒ¿I T|CGA 645, 831, 891, 924
TfiI G|A[AT]TC 265, 377
TseI G|C[AT]GC 506
Tsp45I |GT[CG]AC 295, 514, 768
Tsp509I |AATT 244, 551, 866
TspRI NNCA[CG]TGNN| 295, 655
XmnI GAANN|NNTTC 377


Click here to view TAIR data

>AT3G26790.1 length:942
ATGATGGTTG ATGAAAATGT GGAAACCAAG GCCTCTACTT TAGTGGCAAG 
50
TGTTGATCAT GGGTTTGGAT CCGGGTCGGG TCATGATCAT CATGGGTTAT 
100
CGGCGTCTGT GCCTCTTCTT GGTGTTAACT GGAAGAAGAG AAGGATGCCT 
150
AGACAGAGAC GATCTTCTTC TTCCTTTAAC CTTCTCTCTT TCCCTCCTCC 
200
TATGCCTCCT ATTTCCCACG TGCCAACTCC TCTCCCCGCA CGTAAAATTG 
250
ACCCAAGAAA GCTAAGATTC CTCTTCCAAA AGGAACTCAA GAACAGTGAC 
300
GTCAGCTCTC TCCGACGTAT GATACTCCCG AAGAAAGCCG CGGAGGCTCA 
350
CTTGCCGGCA CTTGAATGCA AGGAAGGGAT TCCTATAAGA ATGGAAGATT 
400
TGGACGGTTT TCACGTTTGG ACCTTCAAGT ATAGGTACTG GCCAAACAAC 
450
AATAGCAGAA TGTACGTGCT AGAAAACACA GGCGATTTTG TGAATGCTCA 
500
TGGTCTGCAG CTAGGTGACT TCATCATGGT TTACCAAGAT CTCTACTCAA 
550
ACAATTACGT TATACAAGCA AGAAAAGCAT CGGAAGAAGA AGAAGTAGAC 
600
GTAATCAATC TTGAAGAAGA CGACGTTTAC ACAAACTTAA CAAGGATCGA 
650
AAACACTGTG GTTAACGATC TTCTCCTCCA AGATTTTAAT CATCACAACA 
700
ACAACAACAA CAACAACAGC AACAGCAACA GCAACAAATG TTCTTACTAT 
750
TATCCAGTCA TAGATGATGT CACCACAAAC ACAGAGTCTT TTGTCTACGA 
800
CACGACGGCT CTTACCTCCA ACGATACTCC TCTCGATTTT TTGGGTGGAC 
850
ATACGACGAC TACTAATAAT TATTACTCCA AGTTCGGAAC ATTCGATGGT 
900
TTGGGCTCCG TTGAGAATAT CTCTCTCGAT GACTTCTACT AG
950

>AT3G26790.1 longest ORF length:313
MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP 
50
RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD 
100
VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN 
150
NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD 
200
VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY 
250
YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG 
300
LGSVENISLD DFY
350