Locus |
Common name |
Short description |
AT3G26790 |
FUS3 |
FUSCA 3, AP2/B3-like transcriptional factor family protein (.1) |
>AT3G26790.1 CDS map
>>Show genomic map
![](/fiore/public_db/temp/temp27101821918567.png)
Uncut enzymes: Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BlpI, BmrI, BpmI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, , NarI, NcoI, NdeI, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacI, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
298 |
AccI
| GT|[AC][TG]AC |
595, 793 |
AccII(FnuDII)
| CG|CG |
337 |
AciI
| C|CGC |
234, 336 |
AluI
| AG|CT |
258, 302, 507 |
AvaII
| G|G[AT]CC |
418 |
BalI
| TGG|CCA |
439 |
BamHI
| G|GATCC |
67 |
BanII
| GPuGCPy|C |
903 |
BclI
| T|GATCA |
54, 84 |
BfaI
| C|TAG |
147, 467, 509, 937 |
BglI
| GCCNNNN|NGGC |
342 |
BglII
| A|GATCT |
537 |
BsaAI
| PyAC|GTPu |
217, 239, 463 |
BsaBI
| GATNN|NNATC |
686 |
BsaHI
| GPu|CGPyC |
102, 298 |
BsaJI
| C|CNNGG |
26, 338 |
BslI
| CCNNNNN|NNGG |
117 |
BsmI
| GAATGCN| |
365, 493 |
Bsp1286I
| G[GAT]GC[CAT]|C |
903 |
BspHI
| T|CATGA |
81 |
BsrFI
| Pu|CCGGPy |
354 |
BsrI
| ACTGGN| |
128, 437 |
BssKI
| |CCNGG |
70 |
BstF5I
| GGATGNN| |
144 |
BstUI
| CG|CG |
337 |
BstYI
| Pu|GATCPy |
67, 537 |
BtgI
| C|CPuPyGG |
338 |
Cac8I
| GCN|NGC |
354 |
Cfr10I
| [AG]|CCGG[TC] |
354 |
DdeI
| C|TNAG |
261 |
DpnI
| GA-CH3|TC |
53, 66, 83, 159, 536, 643, 665 |
DpnII
| |GATC |
53, 66, 83, 159, 536, 643, 665 |
EaeI
| Py|GGCCPu |
439 |
Fnu4HI
| GC|NGC |
336, 506 |
HaeIII
| GG|CC |
28, 438 |
HincII
| GTPy|PuAC |
124, 661 |
HinfI
| G|ANTC |
265, 377, 783 |
HpaI
| GTT|AAC |
124, 661 |
HpaII
| C|CGG |
69, 353 |
Hpy188I
| TCN|GA |
310, 579, 883 |
Hpy99I
| CG[AT]CG| |
312, 620, 802, 853 |
HpyCH4III
| ACN|GT |
292, 403, 654 |
HpyCH4IV
| A|CGT |
216, 238, 297, 313, 411, 462, 555, 597, 621 |
HpyCH4V
| TG|CA |
365, 504 |
MboI
| |GATC |
53, 66, 83, 159, 536, 643, 665 |
MscI
| TGG|CCA |
439 |
MseI
| T|TAA |
123, 174, 635, 660, 684 |
MslI
| CAPyNN|NNPuTG |
363 |
MspA1I
| C[AC]G|C[GT]G |
338 |
MspI
| C|CGG |
69, 353 |
MwoI
| GCNNNNN|NNGC |
342, 573 |
N.BstNBI
| GAGTCNNNN|N |
788 |
NaeI
| GCC|GGC |
354 |
NciI
| CC|[CG]GG |
70 |
NgoMIV
| G|CCGGC |
354 |
NlaIII
| CATG| |
56, 80, 89, 497, 523 |
NlaIV
| GGN|NCC |
67, 904 |
PmlI
| CAC|GTG |
217 |
PstI
| CTGCA|G |
505 |
RsaI
| GT|AC |
433, 460 |
SacII
| CCGC|GG |
338 |
Sau3AI
| |GATC |
53, 66, 83, 159, 536, 643, 665 |
Sau96I
| G|GNCC |
418 |
ScrFI
| CC|NGG |
70 |
SfcI
| C|TPuPyAG |
505 |
SmlI
| C|TPyPuAG |
286 |
StuI
| AGG|CCT |
29 |
StyI
| C|C[AT][AT]GG |
26 |
Taqƒ¿I
| T|CGA |
645, 831, 891, 924 |
TfiI
| G|A[AT]TC |
265, 377 |
TseI
| G|C[AT]GC |
506 |
Tsp45I
| |GT[CG]AC |
295, 514, 768 |
Tsp509I
| |AATT |
244, 551, 866 |
TspRI
| NNCA[CG]TGNN| |
295, 655 |
XmnI
| GAANN|NNTTC |
377 |
Click here to view TAIR data
>AT3G26790.1 length:942
ATGATGGTTG ATGAAAATGT GGAAACCAAG GCCTCTACTT TAGTGGCAAG | 50 |
TGTTGATCAT GGGTTTGGAT CCGGGTCGGG TCATGATCAT CATGGGTTAT | 100 |
CGGCGTCTGT GCCTCTTCTT GGTGTTAACT GGAAGAAGAG AAGGATGCCT | 150 |
AGACAGAGAC GATCTTCTTC TTCCTTTAAC CTTCTCTCTT TCCCTCCTCC | 200 |
TATGCCTCCT ATTTCCCACG TGCCAACTCC TCTCCCCGCA CGTAAAATTG | 250 |
ACCCAAGAAA GCTAAGATTC CTCTTCCAAA AGGAACTCAA GAACAGTGAC | 300 |
GTCAGCTCTC TCCGACGTAT GATACTCCCG AAGAAAGCCG CGGAGGCTCA | 350 |
CTTGCCGGCA CTTGAATGCA AGGAAGGGAT TCCTATAAGA ATGGAAGATT | 400 |
TGGACGGTTT TCACGTTTGG ACCTTCAAGT ATAGGTACTG GCCAAACAAC | 450 |
AATAGCAGAA TGTACGTGCT AGAAAACACA GGCGATTTTG TGAATGCTCA | 500 |
TGGTCTGCAG CTAGGTGACT TCATCATGGT TTACCAAGAT CTCTACTCAA | 550 |
ACAATTACGT TATACAAGCA AGAAAAGCAT CGGAAGAAGA AGAAGTAGAC | 600 |
GTAATCAATC TTGAAGAAGA CGACGTTTAC ACAAACTTAA CAAGGATCGA | 650 |
AAACACTGTG GTTAACGATC TTCTCCTCCA AGATTTTAAT CATCACAACA | 700 |
ACAACAACAA CAACAACAGC AACAGCAACA GCAACAAATG TTCTTACTAT | 750 |
TATCCAGTCA TAGATGATGT CACCACAAAC ACAGAGTCTT TTGTCTACGA | 800 |
CACGACGGCT CTTACCTCCA ACGATACTCC TCTCGATTTT TTGGGTGGAC | 850 |
ATACGACGAC TACTAATAAT TATTACTCCA AGTTCGGAAC ATTCGATGGT | 900 |
TTGGGCTCCG TTGAGAATAT CTCTCTCGAT GACTTCTACT AG | 950 |
>AT3G26790.1 longest ORF length:313
MMVDENVETK ASTLVASVDH GFGSGSGHDH HGLSASVPLL GVNWKKRRMP | 50 |
RQRRSSSSFN LLSFPPPMPP ISHVPTPLPA RKIDPRKLRF LFQKELKNSD | 100 |
VSSLRRMILP KKAAEAHLPA LECKEGIPIR MEDLDGFHVW TFKYRYWPNN | 150 |
NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD LYSNNYVIQA RKASEEEEVD | 200 |
VINLEEDDVY TNLTRIENTV VNDLLLQDFN HHNNNNNNNS NSNSNKCSYY | 250 |
YPVIDDVTTN TESFVYDTTA LTSNDTPLDF LGGHTTTTNN YYSKFGTFDG | 300 |
LGSVENISLD DFY | 350 |
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