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| Locus | Common name | Short description |
| AT3G27010 | ATTCP20, PCF1, AT-TCP20 | ARABIDOPSIS THALIANA TEOSINTE BRANCHED 1, CYCLOIDEA, PCF \(TCP\)-DOMAIN FAMILY PROTEIN 20, TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (.1) |
>AT3G27010.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, HpyCH4III, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, NaeI, , NarI, NciI, NcoI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SapI, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 266, 527 |
| AccII(FnuDII) | CG|CG | 60 |
| AciI | C|CGC | 59 |
| AluI | AG|CT | 207, 224, 370, 391, 427, 436, 604, 652, 847 |
| AlwNI | CAGNNN|CTG | 358, 395 |
| ApoI | Pu|AATTPy | 36, 272 |
| AvaII | G|G[AT]CC | 213 |
| BalI | TGG|CCA | 595 |
| BamHI | G|GATCC | 3 |
| BclI | T|GATCA | 488 |
| BfaI | C|TAG | 297, 315, 513, 567 |
| BlpI | GC|TNAGC | 374 |
| BslI | CCNNNNN|NNGG | 155, 633, 696 |
| BspDI | AT|CGAT | 381 |
| BspHI | T|CATGA | 495 |
| BsrFI | Pu|CCGGPy | 414 |
| BsrI | ACTGGN| | 397, 586, 634 |
| BssKI | |CCNGG | 675, 690, 747 |
| BstF5I | GGATGNN| | 279 |
| BstNI | CC|[AT]GG | 675, 690, 747 |
| BstUI | CG|CG | 60 |
| BstXI | CCANNNNN|NTGG | 538 |
| BstYI | Pu|GATCPy | 3 |
| Cac8I | GCN|NGC | 282 |
| Cfr10I | [AG]|CCGG[TC] | 414 |
| ClaI | AT|CGAT | 381 |
| DdeI | C|TNAG | 133, 217, 373, 500, 799, 811, 838, 932 |
| DpnI | GA-CH3|TC | 2, 151, 487 |
| DpnII | |GATC | 2, 151, 487 |
| EaeI | Py|GGCCPu | 595 |
| EcoRI | G|AATTC | 272 |
| Fnu4HI | GC|NGC | 90, 294, 359, 390, 438 |
| HaeIII | GG|CC | 415, 594 |
| HincII | GTPy|PuAC | 266 |
| HinfI | G|ANTC | 116, 191, 197, 731, 794, 921 |
| HpaII | C|CGG | 413 |
| Hpy188I | TCN|GA | 108, 168, 194, 200, 275, 336, 740, 812 |
| Hpy99I | CG[AT]CG| | 110, 267 |
| HpyCH4V | TG|CA | 388, 439, 712, 873 |
| MboI | |GATC | 2, 151, 487 |
| MfeI | C|AATTG | 310 |
| MscI | TGG|CCA | 595 |
| MseI | T|TAA | 138, 482, 533, 638, 940 |
| MslI | CAPyNN|NNPuTG | 461, 884 |
| MspA1I | C[AC]G|C[GT]G | 437 |
| MspI | C|CGG | 413 |
| MwoI | GCNNNNN|NNGC | 96, 291, 435 |
| N.BstNBI | GAGTCNNNN|N | 196 |
| NdeI | CA|TATG | 703, 871 |
| NlaIII | CATG| | 494, 884 |
| NlaIV | GGN|NCC | 3 |
| NsiI | ATGCA|T | 874 |
| PflMI | CCANNNN|NTGG | 155, 633 |
| PspGI | |CC[AT]GG | 675, 690, 747 |
| PvuII | CAG|CTG | 437 |
| RsaI | GT|AC | 29 |
| SalI | G|TCGAC | 266 |
| Sau3AI | |GATC | 2, 151, 487 |
| Sau96I | G|GNCC | 213 |
| ScrFI | CC|NGG | 675, 690, 747 |
| SmlI | C|TPyPuAG | 754, 770, 845, 851, 926 |
| Taqƒ¿I | T|CGA | 252, 265, 380 |
| TfiI | G|A[AT]TC | 116, 197, 731, 794, 921 |
| TseI | G|C[AT]GC | 90, 294, 359, 390, 438 |
| Tsp45I | |GT[CG]AC | 22 |
| Tsp509I | |AATT | 35, 271, 309, 321, 536, 664 |
| TspRI | NNCA[CG]TGNN| | 356, 634 |
| XcmI | CCANNNNN|NNNNTGG | 462, 592 |
Click here to view TAIR data
>AT3G27010.1 length:945
ATGGATCCCA AGAACCTAAA TCGTCACCAA GTACCAAATT TCTTGAACCC | 50 |
ACCACCACCA CCGCGAAATC AGGGTTTGGT AGATGATGAT GCTGCTTCTG | 100 |
CTGTTGTTTC CGACGAGAAT CGCAAACCAA CAACTGAGAT TAAAGATTTC | 150 |
CAGATCGTGG TCTCTGCTTC CGACAAAGAA CCAAACAAGA AGAGTCAGAA | 200 |
TCAGAACCAG CTTGGTCCTA AGAGAAGCTC TAACAAAGAC AGACACACTA | 250 |
AAGTCGAAGG TAGAGGTCGA CGAATTCGGA TGCCTGCTCT TTGTGCTGCT | 300 |
AGGATTTTTC AATTGACTAG AGAATTGGGT CATAAATCTG ATGGTGAAAC | 350 |
TATCCAGTGG CTGCTTCAAC AAGCTGAGCC ATCGATTATT GCAGCTACTG | 400 |
GTTCAGGAAC TATACCGGCC TCTGCTTTAG CTTCTTCAGC TGCAACCTCT | 450 |
AACCATCATC AAGGTGGGTC TCTTACTGCT GGTTTAATGA TCAGTCATGA | 500 |
CTTAGATGGT GGGTCTAGTA GTAGTGGTAG ACCATTAAAT TGGGGGATTG | 550 |
GTGGCGGTGA AGGAGTTTCT AGGTCAAGTT TACCAACTGG GTTATGGCCA | 600 |
AATGTAGCTG GGTTTGGTTC TGGTGTGCCA ACCACTGGTT TAATGAGTGA | 650 |
AGGAGCTGGT TATAGAATTG GGTTTCCTGG TTTTGATTTT CCTGGTGTTG | 700 |
GTCATATGAG TTTTGCATCT ATTTTGGGTG GGAATCATAA TCAGATGCCT | 750 |
GGACTTGAGT TAGGCTTGTC TCAAGAAGGG AATGTTGGTG TTTTGAATCC | 800 |
TCAGTCTTTT ACTCAGATTT ATCAACAGAT GGGTCAGGCT CAGGCTCAAG | 850 |
CTCAAGGTAG GGTTCTTCAC CATATGCATC ATAACCATGA AGAACATCAG | 900 |
CAAGAGAGTG GTGAGAAAGA TGATTCTCAA GGCTCAGGTC GTTAA | 950 |
>AT3G27010.1 longest ORF length:314
MDPKNLNRHQ VPNFLNPPPP PRNQGLVDDD AASAVVSDEN RKPTTEIKDF | 50 |
QIVVSASDKE PNKKSQNQNQ LGPKRSSNKD RHTKVEGRGR RIRMPALCAA | 100 |
RIFQLTRELG HKSDGETIQW LLQQAEPSII AATGSGTIPA SALASSAATS | 150 |
NHHQGGSLTA GLMISHDLDG GSSSSGRPLN WGIGGGEGVS RSSLPTGLWP | 200 |
NVAGFGSGVP TTGLMSEGAG YRIGFPGFDF PGVGHMSFAS ILGGNHNQMP | 250 |
GLELGLSQEG NVGVLNPQSF TQIYQQMGQA QAQAQGRVLH HMHHNHEEHQ | 300 |
QESGEKDDSQ GSGR | 350 |