Locus |
Common name |
Short description |
AT3G28470 |
TDF1, ATMYB35 |
DEFECTIVE IN MERISTEM DEVELOPMENT AND FUNCTION 1, MYB DOMAIN PROTEIN 35, Duplicated homeodomain-like superfamily protein (.1) |
>AT3G28470.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
754 |
EcoRI
| G|AATTC |
403 |
HindIII
| A|AGCTT |
283 |
NcoI
| C|CATGG |
93, 423 |
SpeI
| A|CTAGT |
658 |
StyI
| C|C[AT][AT]GG |
93, 423 |
Click here to view TAIR data
>AT3G28470.1 length:954
ATGGGAAGAC CTCCTTGTTG TGACAAGTCC AATGTCAAGA AAGGTCTCTG | 50 |
GACCGAGGAA GAAGACGCTA AGATCCTTGC TTATGTTGCT ATCCATGGTG | 100 |
TAGGAAACTG GAGCTTGATC CCCAAAAAAG CAGGTCTGAA TCGATGTGGA | 150 |
AAGAGCTGTA GACTAAGATG GACTAATTAC TTAAGACCTG ACCTTAAACA | 200 |
TGACAGCTTC TCTACCCAAG AAGAAGAGCT TATCATTGAG TGTCATAGAG | 250 |
CCATTGGCAG CAGGTGGTCT TCCATTGCAC GAAAGCTTCC AGGAAGAACG | 300 |
GATAATGATG TGAAGAATCA CTGGAACACA AAGCTGAAGA AGAAGCTGAT | 350 |
GAAAATGGGG ATAGACCCGG TGACTCATAA ACCGGTTTCT CAACTCCTTG | 400 |
CAGAATTCAG AAACATTAGC GGCCATGGAA ATGCATCCTT CAAAACAGAA | 450 |
CCATCTAACA ACTCTATACT CACACAATCC AACTCAGCTT GGGAAATGAT | 500 |
GAGAAACACA ACAACAAACC ATGAGAGTTA TTACACCAAC TCTCCAATGA | 550 |
TGTTTACAAA TTCCTCTGAG TACCAAACTA CTCCATTTCA TTTCTATAGC | 600 |
CATCCAAATC ATCTGCTCAA TGGAACCACA TCTTCATGCT CTTCCTCATC | 650 |
ATCTTCTACT AGTATCACTC AGCCAAACCA AGTACCTCAA ACACCGGTTA | 700 |
CTAACTTCTA CTGGAGCGAT TTCCTTCTCT CGGACCCGGT TCCTCAAGTA | 750 |
GTGGGATCCT CAGCTACTAG CGACCTCACT TTTACGCAGA ACGAACATCA | 800 |
TTTCAACATC GAAGCCGAAT ACATCTCTCA AAACATCGAT TCAAAGGCCT | 850 |
CGGGAACATG TCATTCCGCG AGTTCCTTCG TTGACGAAAT ACTAGATAAA | 900 |
GACCAAGAGA TGTTGTCACA GTTTCCTCAA CTCTTGAATG ATTTCGATTA | 950 |
TTAG | 1000 |
>AT3G28470.1 longest ORF length:317
MGRPPCCDKS NVKKGLWTEE EDAKILAYVA IHGVGNWSLI PKKAGLNRCG | 50 |
KSCRLRWTNY LRPDLKHDSF STQEEELIIE CHRAIGSRWS SIARKLPGRT | 100 |
DNDVKNHWNT KLKKKLMKMG IDPVTHKPVS QLLAEFRNIS GHGNASFKTE | 150 |
PSNNSILTQS NSAWEMMRNT TTNHESYYTN SPMMFTNSSE YQTTPFHFYS | 200 |
HPNHLLNGTT SSCSSSSSST SITQPNQVPQ TPVTNFYWSD FLLSDPVPQV | 250 |
VGSSATSDLT FTQNEHHFNI EAEYISQNID SKASGTCHSA SSFVDEILDK | 300 |
DQEMLSQFPQ LLNDFDY | 350 |
|