fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G29020 ATMYB110 myb domain protein 110 (.1.2)

>AT3G29020.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 436
PstI CTGCA|G 312, 749
PvuII CAG|CTG 633
StyI C|C[AT][AT]GG 758


Click here to view TAIR data

>AT3G29020.2 length:918
ATGAAGATGG ATTTTTCATG TTTCCAAGAA TACCCTTTTG AGTTTCATTG 
50
CAGAGGAACA ACATTTAATG GGTTTAGAGA AAACAATGCA GTGTCTGAAA 
100
CAGTAGAAGA GTTCTGTAAT AAAAGAAGGA TGCAGAAGAA GAGTGATGAT 
150
TTGAAGACTA AGAAGAAGAA GAAACAGAGT GTTTCTAGGG TTTGTAGTAG 
200
AGGACATTGG AGGATCTCTG AAGATACTCA GCTTATGGAG CTTGTTTCGG 
250
TTTACGGTCC TCAAAACTGG AACCACATTG CAGAGAGTAT GCAAGGAAGA 
300
ACAGGAAAGA GCTGCAGATT GAGGTGGTTT AACCAGTTAG ATCCGAGGAT 
350
TAACAAGAGA GCTTTCAGTG ATGAAGAAGA AGAGAGACTA CTTGCTGCTC 
400
ATAGAGCTTT TGGTAACAAA TGGGCTATGA TTGCTAAGCT TTTCAATGGA 
450
AGAACAGATA ATGCCTTGAA GAATCATTGG CATGTTCTCA TGGCAAGGAA 
500
GATGAGACAG CAATCAAGTT CTTACGTCCA AAGATTCAAT GGTTCTGCTC 
550
ATGAATCTAA CACAGATCAC AAAATCTTCA ATCTTTCTCC TGGTAATGTA 
600
GATGATGATG AAGATGTGAA TCTGAAAAAG TGCAGCTGGG AAATGCTAAA 
650
AGAGGGAACT ACTAACCTGA AAGCTCAGTA TCTCCAAGAA GAATATAGTT 
700
CTTCACGCAT GCCGATGCAG GGTCCACATC ATCACTACTC AACCTTCCCT 
750
GCAGATTCCT TGGCACTGAC ACTGCATGTC TCCATCCAGG AACCATCATC 
800
ATCATCGTCA TTATCACTGC CATCATCATC AACAACTGGA GAACATACAA 
850
TGGTGACCAG ATATTTTGAG ACCATTAAAC CTCCAGCATT TATAGATTTT 
900
CTAGGAGTTG GTCACTAA
950

>AT3G29020.2 longest ORF length:305
MKMDFSCFQE YPFEFHCRGT TFNGFRENNA VSETVEEFCN KRRMQKKSDD 
50
LKTKKKKKQS VSRVCSRGHW RISEDTQLME LVSVYGPQNW NHIAESMQGR 
100
TGKSCRLRWF NQLDPRINKR AFSDEEEERL LAAHRAFGNK WAMIAKLFNG 
150
RTDNALKNHW HVLMARKMRQ QSSSYVQRFN GSAHESNTDH KIFNLSPGNV 
200
DDDEDVNLKK CSWEMLKEGT TNLKAQYLQE EYSSSRMPMQ GPHHHYSTFP 
250
ADSLALTLHV SIQEPSSSSS LSLPSSSTTG EHTMVTRYFE TIKPPAFIDF 
300
LGVGH
350