fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G30530 ATBZIP42 basic leucine-zipper 42 (.1)

>AT3G30530.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 84
HindIII A|AGCTT 370
PstI CTGCA|G 55


Click here to view TAIR data

>AT3G30530.1 length:522
ATGCAGCCGC AAACAGACGT TTTCAGCCTC CATAACTACC TAAACTCATC 
50
GATACTGCAG TCTCCGTATC CTTCTAATTT CCCGATATCT ACGCCATTTC 
100
CAACCAACGG TCAAAACCCG TACCTCCTCT ACGGATTCCA AAGCCCTACA 
150
AACAATCCAC AATCCATGAG CCTAAGCAGC AACAACTCAA CATCAGATGA 
200
AGCAGAAGAG CAGCAGACGA ACAACAATAT AATCAACGAG CGGAAGCAGA 
250
GAAGGATGAT TTCAAACCGA GAATCCGCAA GGAGATCGCG TATGAGGAAG 
300
CAAAGACACC TTGACGAGCT TTGGTCACAA GTGATGTGGT TAAGGATCGA 
350
GAATCATCAG TTGCTTGATA AGCTTAACAA TCTCTCTGAG TCTCACGACA 
400
AGGTTCTTCA AGAGAATGCT CAGCTTAAAG AAGAAACATT TGAGCTTAAG 
450
CAAGTGATCA GCGATATGCA AATTCAAAGC CCTTTCTCTT GCTTTAGAGA 
500
CGATATAATC CCCATTGAAT AA
550

>AT3G30530.1 longest ORF length:173
MQPQTDVFSL HNYLNSSILQ SPYPSNFPIS TPFPTNGQNP YLLYGFQSPT 
50
NNPQSMSLSS NNSTSDEAEE QQTNNNIINE RKQRRMISNR ESARRSRMRK 
100
QRHLDELWSQ VMWLRIENHQ LLDKLNNLSE SHDKVLQENA QLKEETFELK 
150
QVISDMQIQS PFSCFRDDII PIE
200