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| Locus | Common name | Short description |
| AT3G42790 | AL3 | alfin-like 3 (.1) |
>AT3G42790.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HpaII, HphI, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tth111I, XbaI, XcmI, XmaI
| Name | Recognition sequence | Cut positions |
| AluI | AG|CT | 10, 85, 190, 223, 509, 685, 691, 739, 745 |
| ApoI | Pu|AATTPy | 183, 622 |
| AvaI | C|PyCGPuG | 743 |
| BanII | GPuGCPy|C | 253, 740 |
| BclI | T|GATCA | 380 |
| BfaI | C|TAG | 243, 687 |
| BlpI | GC|TNAGC | 695 |
| BsaJI | C|CNNGG | 573, 660 |
| BsiHKAI | G[AT]GC[AT]|C | 740 |
| BslI | CCNNNNN|NNGG | 134, 228 |
| BsoBI | C|PyCGPuG | 743 |
| Bsp1286I | G[GAT]GC[CAT]|C | 253, 717, 740 |
| BsrI | ACTGGN| | 415 |
| BstEII | G|GTNACC | 159 |
| BstF5I | GGATGNN| | 250, 568 |
| BstYI | Pu|GATCPy | 629 |
| BtgI | C|CPuPyGG | 573, 660 |
| Cac8I | GCN|NGC | 222 |
| DdeI | C|TNAG | 130, 208, 694 |
| DpnI | GA-CH3|TC | 379, 628, 676 |
| DpnII | |GATC | 379, 628, 676 |
| EcoRI | G|AATTC | 622 |
| Fnu4HI | GC|NGC | 12, 447, 524, 727 |
| HinfI | G|ANTC | 140 |
| Hpy188I | TCN|GA | 258, 498 |
| Hpy99I | CG[AT]CG| | 66 |
| HpyCH4III | ACN|GT | 33, 292, 308, 604 |
| HpyCH4V | TG|CA | 448, 725 |
| MboI | |GATC | 379, 628, 676 |
| MseI | T|TAA | 234, 748 |
| MspA1I | C[AC]G|C[GT]G | 191 |
| MwoI | GCNNNNN|NNGC | 724 |
| NcoI | C|CATGG | 660 |
| NlaIII | CATG| | 376, 659, 723 |
| NlaIV | GGN|NCC | 592, 656 |
| PaeR7I | C|TCGAG | 743 |
| PflMI | CCANNNN|NTGG | 228 |
| PvuII | CAG|CTG | 191 |
| RsaI | GT|AC | 69 |
| SacI | GAGCT|C | 740 |
| Sau3AI | |GATC | 379, 628, 676 |
| SmlI | C|TPyPuAG | 333, 743 |
| StyI | C|C[AT][AT]GG | 660 |
| Taqƒ¿I | T|CGA | 28, 36, 742 |
| TfiI | G|A[AT]TC | 140 |
| TliI | C|TCGAG | 743 |
| TseI | G|C[AT]GC | 12, 447, 524, 727 |
| Tsp45I | |GT[CG]AC | 124, 295, 411, 637 |
| Tsp509I | |AATT | 182, 621 |
| TspRI | NNCA[CG]TGNN| | 295, 607 |
| XhoI | C|TCGAG | 743 |
| XmnI | GAANN|NNTTC | 655 |
Click here to view TAIR data
>AT3G42790.1 length:753
ATGGAAGGTG GAGCTGCTCT CTACAATCCT CGAACTGTCG AAGAAGTTTT | 50 |
CAAGGATTTC AAAGGTCGTC GTACTGCCAT TGTCAAAGCT CTCACCACCG | 100 |
ATGTTCAAGA GTTTTACCAA CAATGTGACC CTGAGAAGGA GAATCTTTGC | 150 |
TTGTATGGGT TACCGAATGA AGAATGGGAA GTGAATTTAC CAGCTGAAGA | 200 |
AGTGCCTCCT GAGTTACCAG AGCCAGCTCT TGGTATTAAC TTTGCTAGGG | 250 |
ATGGGCTCTC TGAAAAGGAA TGGCTTTCGC TTGTTGCTAT TCACAGTGAC | 300 |
GCTTGGTTAC TGTCTGTCTC GTTTTACTTT GGCTCAAGGT TTTCTTTCCA | 350 |
CAAGGAAGAG AGGAAGCGTT TGTTCAACAT GATCAATGAT GTTCCTACTA | 400 |
TATTTGAAGT AGTGACTGGA ATGGCTAAAG CAAAGGACAA GTCATCTGCT | 450 |
GCAAATCAAA ACGGAAACAA ATCCAAGTCT AACTCTAAAG TTAGAACTTC | 500 |
AGAGGGAAAA AGCTCAAAGA CCAAGCAGCC AAAAGAGGAG GACGAAGAAA | 550 |
TAGATGAAGA TGATGAGGAT GACCACGGGG AAACCCTTTG TGGAGCCTGT | 600 |
GGAGACAGTG ATGGTGCTGA TGAATTCTGG ATCTGCTGTG ACCTTTGTGA | 650 |
GAAGTGGTTC CATGGCAAGT GTGTGAAGAT CACTCCAGCT AGAGCTGAGC | 700 |
ATATCAAACA ATACAAGTGC CCTTCATGCA GCAACAAAAG AGCTCGAGCT | 750 |
TAA | 800 |
>AT3G42790.1 longest ORF length:250
MEGGAALYNP RTVEEVFKDF KGRRTAIVKA LTTDVQEFYQ QCDPEKENLC | 50 |
LYGLPNEEWE VNLPAEEVPP ELPEPALGIN FARDGLSEKE WLSLVAIHSD | 100 |
AWLLSVSFYF GSRFSFHKEE RKRLFNMIND VPTIFEVVTG MAKAKDKSSA | 150 |
ANQNGNKSKS NSKVRTSEGK SSKTKQPKEE DEEIDEDDED DHGETLCGAC | 200 |
GDSDGADEFW ICCDLCEKWF HGKCVKITPA RAEHIKQYKC PSCSNKRARA | 250 |