fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G43440 TIFY3A, JAZ11 jasmonate-zim-domain protein 11 (.1.2)

>AT3G43440.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
PstI CTGCA|G 476
PvuII CAG|CTG 440
SacI GAGCT|C 269
XhoI C|TCGAG 334


Click here to view TAIR data

>AT3G43440.1 length:717
ATGGCTGAGG TAAACGGAGA TTTCCCCGTT CCTAGTTTCG CCGACGGGAC 
50
CGGTTCTGTT TCCGCCGGAC TTGACTTGCT CGTTGAGAGA TCGATTCACG 
100
AAGCTAGGTC CACAGAGCCA GATGCTTCAA CTCAACTTAC TATTATCTTT 
150
GGTGGGAGTT GTAGAGTCTT CAATGGTGTC CCTGCACAAA AGGTTCAAGA 
200
AATCATTCGC ATCGCTTTTG CTGGTAAACA GACGAAGAAT GTGACCGGTA 
250
TCAATCCAGC ACTGAACAGA GCTCTTTCTT TCTCAACTGT AGCTGATCTT 
300
CCAATTGCTA GGAGACGTTC GCTTCAAAGA TTTCTCGAGA AGAGACGGGA 
350
CAGGTCCACG AAGCCAGATG GTTCAATGAT CCTTCCAAGT CAACTAACCA 
400
TTATTTTTGG TGGGAGTTTT AGCGTATTTG ATGGTATTCC AGCTGAAAAG 
450
GTTCAAGAAA TTCTGCATAT CGCTGCTGCA GCTAAAGCCA CTGAGACAAT 
500
TAATTTGACC AGTATAAATC CAGCATTAAA GAGAGCTATT TCATTCTCAA 
550
ACGCATCAAC AGTAGCTTGC GTATCGACAG CAGATGTGCC AATTGCTAGG 
600
AGACGTTCAC TTCAAAGATT TTTTGAGAAA AGACGGCATC GATTTGTCCA 
650
CACGAAGCCT TACTCTGCTA CGACTTCGGA AGCAGACAAA AATGAAACCA 
700
GCCCCATTGT GACATGA
750

>AT3G43440.1 longest ORF length:238
MAEVNGDFPV PSFADGTGSV SAGLDLLVER SIHEARSTEP DASTQLTIIF 
50
GGSCRVFNGV PAQKVQEIIR IAFAGKQTKN VTGINPALNR ALSFSTVADL 
100
PIARRRSLQR FLEKRRDRST KPDGSMILPS QLTIIFGGSF SVFDGIPAEK 
150
VQEILHIAAA AKATETINLT SINPALKRAI SFSNASTVAC VSTADVPIAR 
200
RRSLQRFFEK RRHRFVHTKP YSATTSEADK NETSPIVT
250