Locus |
Common name |
Short description |
AT3G43440 |
TIFY3A, JAZ11 |
jasmonate-zim-domain protein 11 (.1.2) |
>AT3G43440.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI
Name |
Recognition sequence |
Cut positions |
PstI
| CTGCA|G |
476 |
PvuII
| CAG|CTG |
440 |
SacI
| GAGCT|C |
269 |
XhoI
| C|TCGAG |
334 |
Click here to view TAIR data
>AT3G43440.1 length:717
ATGGCTGAGG TAAACGGAGA TTTCCCCGTT CCTAGTTTCG CCGACGGGAC | 50 |
CGGTTCTGTT TCCGCCGGAC TTGACTTGCT CGTTGAGAGA TCGATTCACG | 100 |
AAGCTAGGTC CACAGAGCCA GATGCTTCAA CTCAACTTAC TATTATCTTT | 150 |
GGTGGGAGTT GTAGAGTCTT CAATGGTGTC CCTGCACAAA AGGTTCAAGA | 200 |
AATCATTCGC ATCGCTTTTG CTGGTAAACA GACGAAGAAT GTGACCGGTA | 250 |
TCAATCCAGC ACTGAACAGA GCTCTTTCTT TCTCAACTGT AGCTGATCTT | 300 |
CCAATTGCTA GGAGACGTTC GCTTCAAAGA TTTCTCGAGA AGAGACGGGA | 350 |
CAGGTCCACG AAGCCAGATG GTTCAATGAT CCTTCCAAGT CAACTAACCA | 400 |
TTATTTTTGG TGGGAGTTTT AGCGTATTTG ATGGTATTCC AGCTGAAAAG | 450 |
GTTCAAGAAA TTCTGCATAT CGCTGCTGCA GCTAAAGCCA CTGAGACAAT | 500 |
TAATTTGACC AGTATAAATC CAGCATTAAA GAGAGCTATT TCATTCTCAA | 550 |
ACGCATCAAC AGTAGCTTGC GTATCGACAG CAGATGTGCC AATTGCTAGG | 600 |
AGACGTTCAC TTCAAAGATT TTTTGAGAAA AGACGGCATC GATTTGTCCA | 650 |
CACGAAGCCT TACTCTGCTA CGACTTCGGA AGCAGACAAA AATGAAACCA | 700 |
GCCCCATTGT GACATGA | 750 |
>AT3G43440.1 longest ORF length:238
MAEVNGDFPV PSFADGTGSV SAGLDLLVER SIHEARSTEP DASTQLTIIF | 50 |
GGSCRVFNGV PAQKVQEIIR IAFAGKQTKN VTGINPALNR ALSFSTVADL | 100 |
PIARRRSLQR FLEKRRDRST KPDGSMILPS QLTIIFGGSF SVFDGIPAEK | 150 |
VQEILHIAAA AKATETINLT SINPALKRAI SFSNASTVAC VSTADVPIAR | 200 |
RRSLQRFFEK RRHRFVHTKP YSATTSEADK NETSPIVT | 250 |
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