fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G45150 TCP16 TCP domain protein 16 (.1)

>AT3G45150.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 95
EcoRV GAT|ATC 247


Click here to view TAIR data

>AT3G45150.1 length:498
ATGGATTCGA AAAATGGAAT TAACAACAGC CAAAAGGCAA GAAGGACTCC 
50
AAAAGACCGC CATTTGAAAA TTGGTGGCCG TGATCGTCGC ATTCGGATCC 
100
CGCCGAGTGT TGCTCCCCAA CTATTTAGAT TGACAAAAGA ACTCGGCTTT 
150
AAAACCGATG GTGAAACTGT CAGTTGGCTC CTCCAGAATG CCGAGCCTGC 
200
CATTTTCGCA GCCACGGGAC ATGGTGTCAC CACCACCTCC AATGAAGATA 
250
TCCAGCCAAA TAGGAATTTT CCTAGTTACA CCTTTAATGG TGATAATATT 
300
AGTAATAACG TTTTCCCTTG TACGGTTGTA AATACTGGTC ATCGTCAGAT 
350
GGTGTTTCCG GTTTCTACAA TGACAGATCA TGCACCTTCA ACTAATTACA 
400
GTACTATTAG TGATAATTAC AATTCCACCT TTAATGGTAA TGCTACCGCC 
450
AGTGATACAA CATCAGCAGC AACAACAACA GCCACAACCA CAGTTTGA
500

>AT3G45150.1 longest ORF length:165
MDSKNGINNS QKARRTPKDR HLKIGGRDRR IRIPPSVAPQ LFRLTKELGF 
50
KTDGETVSWL LQNAEPAIFA ATGHGVTTTS NEDIQPNRNF PSYTFNGDNI 
100
SNNVFPCTVV NTGHRQMVFP VSTMTDHAPS TNYSTISDNY NSTFNGNATA 
150
SDTTSAATTT ATTTV
200