fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G45170 GATA14 GATA transcription factor 14 (.1)

>AT3G45170.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 27, 309
NcoI C|CATGG 86
StyI C|C[AT][AT]GG 86
XhoI C|TCGAG 167


Click here to view TAIR data

>AT3G45170.1 length:615
ATGTCGGGTC GTGAAGATGA AGAAGAAGAT CTTGGAACTG CCATGCAGAA 
50
AATTCCCATC CCTGTCAACG TATTCGATAA AGAACCCATG GATTTGGATA 
100
CGGTTTTCGG TTTTGCTGAT GGAGTAAGAG AGATCATAGA AGATTCCAAT 
150
TTACTACTTG AGGAATCTCG AGAGTTTGAT ACAAACGATT CCAAACCGTC 
200
TCGAAACTTC TCAAATCTGC CAACCGCGAC AAGAGGTCGT CTTCATGCAC 
250
CAAAACGATC TGGAAACAAG CGAGGAAGAC AAAAAAGACT GTCTTTCAAG 
300
AGTCCATCAG ATCTTTTTGA TTCTAAATTT GGCATTACCG ACAAGAGTTG 
350
TTCACATTGC GGGACGAGAA AGACTCCGCT ATGGAGAGAA GGACCGAGAG 
400
GAGCGGGAAC GCTATGTAAC GCGTGCGGGA TGCGATACAG GACAGGTCGG 
450
CTACTTCCCG AGTACCGCCC TGCTTCAAGT CCGGATTTCA AACCTAACGT 
500
TCACTCCAAC TTTCATCGAA AGGTTATGGA AATCAGAAGG GAGAGGAAGT 
550
CATCTCCTCC GAATAGCTTC GGTTTCTCGG AGTCGTATCA TTCAACTAGG 
600
AAATTAGGGT TTTGA
650

>AT3G45170.1 longest ORF length:204
MSGREDEEED LGTAMQKIPI PVNVFDKEPM DLDTVFGFAD GVREIIEDSN 
50
LLLEESREFD TNDSKPSRNF SNLPTATRGR LHAPKRSGNK RGRQKRLSFK 
100
SPSDLFDSKF GITDKSCSHC GTRKTPLWRE GPRGAGTLCN ACGMRYRTGR 
150
LLPEYRPASS PDFKPNVHSN FHRKVMEIRR ERKSSPPNSF GFSESYHSTR 
200
KLGF
250