Locus |
Common name |
Short description |
AT3G45170 |
GATA14 |
GATA transcription factor 14 (.1) |
>AT3G45170.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
27, 309 |
NcoI
| C|CATGG |
86 |
StyI
| C|C[AT][AT]GG |
86 |
XhoI
| C|TCGAG |
167 |
Click here to view TAIR data
>AT3G45170.1 length:615
ATGTCGGGTC GTGAAGATGA AGAAGAAGAT CTTGGAACTG CCATGCAGAA | 50 |
AATTCCCATC CCTGTCAACG TATTCGATAA AGAACCCATG GATTTGGATA | 100 |
CGGTTTTCGG TTTTGCTGAT GGAGTAAGAG AGATCATAGA AGATTCCAAT | 150 |
TTACTACTTG AGGAATCTCG AGAGTTTGAT ACAAACGATT CCAAACCGTC | 200 |
TCGAAACTTC TCAAATCTGC CAACCGCGAC AAGAGGTCGT CTTCATGCAC | 250 |
CAAAACGATC TGGAAACAAG CGAGGAAGAC AAAAAAGACT GTCTTTCAAG | 300 |
AGTCCATCAG ATCTTTTTGA TTCTAAATTT GGCATTACCG ACAAGAGTTG | 350 |
TTCACATTGC GGGACGAGAA AGACTCCGCT ATGGAGAGAA GGACCGAGAG | 400 |
GAGCGGGAAC GCTATGTAAC GCGTGCGGGA TGCGATACAG GACAGGTCGG | 450 |
CTACTTCCCG AGTACCGCCC TGCTTCAAGT CCGGATTTCA AACCTAACGT | 500 |
TCACTCCAAC TTTCATCGAA AGGTTATGGA AATCAGAAGG GAGAGGAAGT | 550 |
CATCTCCTCC GAATAGCTTC GGTTTCTCGG AGTCGTATCA TTCAACTAGG | 600 |
AAATTAGGGT TTTGA | 650 |
>AT3G45170.1 longest ORF length:204
MSGREDEEED LGTAMQKIPI PVNVFDKEPM DLDTVFGFAD GVREIIEDSN | 50 |
LLLEESREFD TNDSKPSRNF SNLPTATRGR LHAPKRSGNK RGRQKRLSFK | 100 |
SPSDLFDSKF GITDKSCSHC GTRKTPLWRE GPRGAGTLCN ACGMRYRTGR | 150 |
LLPEYRPASS PDFKPNVHSN FHRKVMEIRR ERKSSPPNSF GFSESYHSTR | 200 |
KLGF | 250 |
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