fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G45260 C2H2-like zinc finger protein (.1)

>AT3G45260.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
KpnI GGTAC|C 529
NcoI C|CATGG 277, 666
SmaI CCC|GGG 132
StyI C|C[AT][AT]GG 277, 375, 666


Click here to view TAIR data

>AT3G45260.1 length:1341
ATGATGATGC CAGATGATCA TCATCCCCTC TCATTTCCCA GCTATGTCCT 
50
TCACCAAGAA CACATCGCTC CAAATCCTAA CCCTAACCCT AATCCTACCT 
100
CCTCTAACTC AGCCAAGAGG AAGAGAAATC TCCCGGGAAA TCCAGATCCA 
150
GATGCAGAAG TCATCGCTCT ATCACCAAAC TCCCTCATGA CAACTAATCG 
200
ATTCATCTGC GAGGTTTGCA ACAAAGGATT TAAGAGAGAC CAGAACCTTC 
250
AGCTTCACCG GAGAGGCCAT AACCTTCCAT GGAAGCTAAA GCAAAGGACA 
300
AACAAGGAGC AAGTGAAGAA AAAAGTGTAC ATCTGTCCAG AGAAGACTTG 
350
CGTACACCAT GACCCGGCCC GAGCCCTTGG TGACTTAACT GGAATTAAGA 
400
AGCATTTCAG CAGGAAACAT GGTGAAAAGA AGTGGAAATG TGACAAGTGT 
450
TCCAAGAAAT ATGCTGTCAT GTCCGATTGG AAAGCTCATA GCAAGATTTG 
500
TGGTACTAAA GAATACAGAT GTGACTGTGG TACCCTCTTT TCCAGGAAAG 
550
ATAGTTTCAT CACACATAGA GCATTCTGTG ACGCTTTAGC TGAAGAGAGT 
600
GCTAGATTTG TCTCAGTTCC ACCAGCACCC GCATATTTGA ACAATGCCCT 
650
GGATGTGGAA GTCAACCATG GAAATATCAA CCAAAATCAT CAACAACGAC 
700
AGCTTAATAC TACTTCGTCA CAATTGGACC AACCTGGTTT TAATACCAAT 
750
CGCAATAACA TTGCCTTTTT GGGACAAACC TTACCAACCA ACGTTTTTGC 
800
GTCCTCATCA TCTCCATCAC CTCGTAGTGC ATCCGACTCC CTTCAAAATC 
850
TATGGCATTT ACAAGGACAA TCATCTCACC AATGGCTTCT CAACGAAAAC 
900
AACAACAACA ACAACAACAT TCTCCAAAGG GGAATCTCCA AAAATCAAGA 
950
AGAACATGAG ATGAAGAATG TGATTAGTAA TGGTTCTTTG TTCTCTTCGG 
1000
AAGCACGAAA CAACACTAAT AATTATAACC AAAACGGTGG ACAAATAGCA 
1050
TCAATGTCAG CCACGGCATT GCTACAAAAG GCAGCTCAAA TGGGATCAAA 
1100
GAGATCATCA TCAAGCTCAA GCAATAGCAA GACTTTTGGT CTAATGACCT 
1150
CTATCTTCAA CAACAAACAA GCAGAGAATA TCAAAACTAA GGAAGTTGAT 
1200
GAAAGAGGTT TCACGAGAGA CTTTCTTGGT GTGGGAAGTC AACACCGTTC 
1250
TTGGCCGTTA TTGATGGTCA ACCATAATCT TCCAGACTCG TCTCCTCCGG 
1300
CCTCCACGGA CGGCACACCA ACCGCCGACA TGAACCAGTA A
1350

>AT3G45260.1 longest ORF length:446
MMMPDDHHPL SFPSYVLHQE HIAPNPNPNP NPTSSNSAKR KRNLPGNPDP 
50
DAEVIALSPN SLMTTNRFIC EVCNKGFKRD QNLQLHRRGH NLPWKLKQRT 
100
NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC 
150
SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES 
200
ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN 
250
RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN 
300
NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA 
350
SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD 
400
ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ
450