fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G46070 C2H2-type zinc finger family protein (.1)

>AT3G46070.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 146


Click here to view TAIR data

>AT3G46070.1 length:513
ATGGTTGCTG AAAGTGATAA TCGTGATCTG ACGGTGGATA CGGCGGCGAG 
50
CTGTCTGATG TTGTTATCAG GAATTGGAGA ACACGACGGA AGAAAGAAAC 
100
GTGTTTTCCG ATGCAAGACT TGTGAGAGAG ACTTCGATTC GTTCCAAGCT 
150
TTAGGAGGCC ACCGTGCAAG CCACTCGAAA CTAACCAACA GTGACGATAA 
200
ATCACTTCCT GGATCACCAA AGAAGAAGCC TAAAACTACG ACTACGACGA 
250
CGGCTCATAC TTGTCCGATT TGTGGCTTGG AGTTTCCGAT GGGACAAGCT 
300
CTTGGTGGTC ACATGAGGAA ACATAGGAAC GAGAAAGAAC GAGAAAAGGC 
350
TTCTAACGTA TTGGTTACGC ATTCTTTCAT GCCGGAGACG ACAACGGTGA 
400
CGACTTTGAA GAAATCGAGT AGTGGGAAGA GAGTGGCGTG TTTGGATTTC 
450
GACTTAACTT CGGTGGAGAG CTTTGTCAAC ACGGAATTGG AGTTGGGAAG 
500
AACGATGTAC TGA
550

>AT3G46070.1 longest ORF length:170
MVAESDNRDL TVDTAASCLM LLSGIGEHDG RKKRVFRCKT CERDFDSFQA 
50
LGGHRASHSK LTNSDDKSLP GSPKKKPKTT TTTTAHTCPI CGLEFPMGQA 
100
LGGHMRKHRN EKEREKASNV LVTHSFMPET TTVTTLKKSS SGKRVACLDF 
150
DLTSVESFVN TELELGRTMY 
200