fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G46130 PFG3, ATMYB111 ATMYB48, ATMYB48-3, ATMYB48-1, ATMYB48-2 myb domain protein 48 (.1.2.3.4)

>AT3G46130.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 696
NcoI C|CATGG 31, 754
NdeI CA|TATG 316
PstI CTGCA|G 378
StyI C|C[AT][AT]GG 31, 754


Click here to view TAIR data

>AT3G46130.1 length:771
ATGATGCAAG AGGAGGGAAA CCGAAAAGGT CCATGGACAG AACAGGAAGA 
50
CATACTTCTG GTAAATTTTG TTCACTTATT TGGAGATCGA CGATGGGATT 
100
TTATAGCAAA AGTATCAGGT TTGAACAGAA CAGGAAAGAG TTGCAGGCTA 
150
AGATGGGTTA ATTACCTACA TCCTGGTCTC AAACGTGGCA AGATGACGCC 
200
TCAAGAAGAG CGCCTCGTCC TTGAGCTTCA CGCTAAGTGG GGAAACAGGT 
250
GGTCGAAAAT AGCCCGAAAA TTGCCGGGAC GAACGGATAA CGAGATAAAG 
300
AACTACTGGA GGACTCATAT GAGGAAGAAA GCTCAAGAAA AGAAGCGTCC 
350
TGTTTCCCCA ACTTCCTCAT TTTCCAACTG CAGCTCGTCA TCTGTGACCA 
400
CTACCACCAC CAATACTCAA GATACATCGT GCCACTCGCG TAAATCTTCA 
450
GGGGAAGTGA GCTTTTACGA CACTGGAGGT TCCCGATCCA CTAGAGAGAT 
500
GAATCAAGAA AACGAAGACG TGTACTCGTT GGATGATATA TGGAGAGAGA 
550
TTGATCACTC AGCAGTAAAC ATAATAAAAC CGGTTAAAGA CATCTACTCA 
600
GAACAAAGCC ATTGCTTAAG TTACCCAAAT CTAGCTTCAC CATCATGGGA 
650
AAGCTCATTG GATTCTATAT GGAACATGGA TGCAGATAAA AGTAAGATAT 
700
CGTCTTACTT TGCAAATGAT CAGTTTCCTT TCTGTTTCCA ACACAGTAGA 
750
TCACCATGGT CGTCAGGTTA A
800

>AT3G46130.1 longest ORF length:256
MMQEEGNRKG PWTEQEDILL VNFVHLFGDR RWDFIAKVSG LNRTGKSCRL 
50
RWVNYLHPGL KRGKMTPQEE RLVLELHAKW GNRWSKIARK LPGRTDNEIK 
100
NYWRTHMRKK AQEKKRPVSP TSSFSNCSSS SVTTTTTNTQ DTSCHSRKSS 
150
GEVSFYDTGG SRSTREMNQE NEDVYSLDDI WREIDHSAVN IIKPVKDIYS 
200
EQSHCLSYPN LASPSWESSL DSIWNMDADK SKISSYFAND QFPFCFQHSR 
250
SPWSSG
300