Locus |
Common name |
Short description |
AT3G46130 |
PFG3, ATMYB111 ATMYB48, ATMYB48-3, ATMYB48-1, ATMYB48-2 |
myb domain protein 48 (.1.2.3.4) |
>AT3G46130.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
696 |
NcoI
| C|CATGG |
31, 754 |
NdeI
| CA|TATG |
316 |
PstI
| CTGCA|G |
378 |
StyI
| C|C[AT][AT]GG |
31, 754 |
Click here to view TAIR data
>AT3G46130.1 length:771
ATGATGCAAG AGGAGGGAAA CCGAAAAGGT CCATGGACAG AACAGGAAGA | 50 |
CATACTTCTG GTAAATTTTG TTCACTTATT TGGAGATCGA CGATGGGATT | 100 |
TTATAGCAAA AGTATCAGGT TTGAACAGAA CAGGAAAGAG TTGCAGGCTA | 150 |
AGATGGGTTA ATTACCTACA TCCTGGTCTC AAACGTGGCA AGATGACGCC | 200 |
TCAAGAAGAG CGCCTCGTCC TTGAGCTTCA CGCTAAGTGG GGAAACAGGT | 250 |
GGTCGAAAAT AGCCCGAAAA TTGCCGGGAC GAACGGATAA CGAGATAAAG | 300 |
AACTACTGGA GGACTCATAT GAGGAAGAAA GCTCAAGAAA AGAAGCGTCC | 350 |
TGTTTCCCCA ACTTCCTCAT TTTCCAACTG CAGCTCGTCA TCTGTGACCA | 400 |
CTACCACCAC CAATACTCAA GATACATCGT GCCACTCGCG TAAATCTTCA | 450 |
GGGGAAGTGA GCTTTTACGA CACTGGAGGT TCCCGATCCA CTAGAGAGAT | 500 |
GAATCAAGAA AACGAAGACG TGTACTCGTT GGATGATATA TGGAGAGAGA | 550 |
TTGATCACTC AGCAGTAAAC ATAATAAAAC CGGTTAAAGA CATCTACTCA | 600 |
GAACAAAGCC ATTGCTTAAG TTACCCAAAT CTAGCTTCAC CATCATGGGA | 650 |
AAGCTCATTG GATTCTATAT GGAACATGGA TGCAGATAAA AGTAAGATAT | 700 |
CGTCTTACTT TGCAAATGAT CAGTTTCCTT TCTGTTTCCA ACACAGTAGA | 750 |
TCACCATGGT CGTCAGGTTA A | 800 |
>AT3G46130.1 longest ORF length:256
MMQEEGNRKG PWTEQEDILL VNFVHLFGDR RWDFIAKVSG LNRTGKSCRL | 50 |
RWVNYLHPGL KRGKMTPQEE RLVLELHAKW GNRWSKIARK LPGRTDNEIK | 100 |
NYWRTHMRKK AQEKKRPVSP TSSFSNCSSS SVTTTTTNTQ DTSCHSRKSS | 150 |
GEVSFYDTGG SRSTREMNQE NEDVYSLDDI WREIDHSAVN IIKPVKDIYS | 200 |
EQSHCLSYPN LASPSWESSL DSIWNMDADK SKISSYFAND QFPFCFQHSR | 250 |
SPWSSG | 300 |
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