Locus |
Common name |
Short description |
AT3G46130 |
PFG3, ATMYB111 ATMYB48, ATMYB48-3, ATMYB48-1, ATMYB48-2 |
myb domain protein 48 (.1.2.3.4) |
>AT3G46130.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
504 |
NcoI
| C|CATGG |
562 |
NdeI
| CA|TATG |
124 |
PstI
| CTGCA|G |
186 |
StyI
| C|C[AT][AT]GG |
562 |
Click here to view TAIR data
>AT3G46130.2 length:579
ATGACGCCTC AAGAAGAGCG CCTCGTCCTT GAGCTTCACG CTAAGTGGGG | 50 |
AAACAGGTGG TCGAAAATAG CCCGAAAATT GCCGGGACGA ACGGATAACG | 100 |
AGATAAAGAA CTACTGGAGG ACTCATATGA GGAAGAAAGC TCAAGAAAAG | 150 |
AAGCGTCCTG TTTCCCCAAC TTCCTCATTT TCCAACTGCA GCTCGTCATC | 200 |
TGTGACCACT ACCACCACCA ATACTCAAGA TACATCGTGC CACTCGCGTA | 250 |
AATCTTCAGG GGAAGTGAGC TTTTACGACA CTGGAGGTTC CCGATCCACT | 300 |
AGAGAGATGA ATCAAGAAAA CGAAGACGTG TACTCGTTGG ATGATATATG | 350 |
GAGAGAGATT GATCACTCAG CAGTAAACAT AATAAAACCG GTTAAAGACA | 400 |
TCTACTCAGA ACAAAGCCAT TGCTTAAGTT ACCCAAATCT AGCTTCACCA | 450 |
TCATGGGAAA GCTCATTGGA TTCTATATGG AACATGGATG CAGATAAAAG | 500 |
TAAGATATCG TCTTACTTTG CAAATGATCA GTTTCCTTTC TGTTTCCAAC | 550 |
ACAGTAGATC ACCATGGTCG TCAGGTTAA | 600 |
>AT3G46130.2 longest ORF length:192
MTPQEERLVL ELHAKWGNRW SKIARKLPGR TDNEIKNYWR THMRKKAQEK | 50 |
KRPVSPTSSF SNCSSSSVTT TTTNTQDTSC HSRKSSGEVS FYDTGGSRST | 100 |
REMNQENEDV YSLDDIWREI DHSAVNIIKP VKDIYSEQSH CLSYPNLASP | 150 |
SWESSLDSIW NMDADKSKIS SYFANDQFPF CFQHSRSPWS SG | 200 |
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