fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G46130 PFG3, ATMYB111 ATMYB48, ATMYB48-3, ATMYB48-1, ATMYB48-2 myb domain protein 48 (.1.2.3.4)

>AT3G46130.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 504
NcoI C|CATGG 562
NdeI CA|TATG 124
PstI CTGCA|G 186
StyI C|C[AT][AT]GG 562


Click here to view TAIR data

>AT3G46130.2 length:579
ATGACGCCTC AAGAAGAGCG CCTCGTCCTT GAGCTTCACG CTAAGTGGGG 
50
AAACAGGTGG TCGAAAATAG CCCGAAAATT GCCGGGACGA ACGGATAACG 
100
AGATAAAGAA CTACTGGAGG ACTCATATGA GGAAGAAAGC TCAAGAAAAG 
150
AAGCGTCCTG TTTCCCCAAC TTCCTCATTT TCCAACTGCA GCTCGTCATC 
200
TGTGACCACT ACCACCACCA ATACTCAAGA TACATCGTGC CACTCGCGTA 
250
AATCTTCAGG GGAAGTGAGC TTTTACGACA CTGGAGGTTC CCGATCCACT 
300
AGAGAGATGA ATCAAGAAAA CGAAGACGTG TACTCGTTGG ATGATATATG 
350
GAGAGAGATT GATCACTCAG CAGTAAACAT AATAAAACCG GTTAAAGACA 
400
TCTACTCAGA ACAAAGCCAT TGCTTAAGTT ACCCAAATCT AGCTTCACCA 
450
TCATGGGAAA GCTCATTGGA TTCTATATGG AACATGGATG CAGATAAAAG 
500
TAAGATATCG TCTTACTTTG CAAATGATCA GTTTCCTTTC TGTTTCCAAC 
550
ACAGTAGATC ACCATGGTCG TCAGGTTAA
600

>AT3G46130.2 longest ORF length:192
MTPQEERLVL ELHAKWGNRW SKIARKLPGR TDNEIKNYWR THMRKKAQEK 
50
KRPVSPTSSF SNCSSSSVTT TTTNTQDTSC HSRKSSGEVS FYDTGGSRST 
100
REMNQENEDV YSLDDIWREI DHSAVNIIKP VKDIYSEQSH CLSYPNLASP 
150
SWESSLDSIW NMDADKSKIS SYFANDQFPF CFQHSRSPWS SG
200