Locus |
Common name |
Short description |
AT3G46130 |
PFG3, ATMYB111 ATMYB48, ATMYB48-3, ATMYB48-1, ATMYB48-2 |
myb domain protein 48 (.1.2.3.4) |
>AT3G46130.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
606 |
NcoI
| C|CATGG |
664 |
NdeI
| CA|TATG |
226 |
PstI
| CTGCA|G |
288 |
StyI
| C|C[AT][AT]GG |
664 |
Click here to view TAIR data
>AT3G46130.3 length:681
ATGGACAGAA CAGGAAGACA TACTTCTGGT TTGAACAGAA CAGGAAAGAG | 50 |
TTGCAGGCTA AGATGGGTTA ATTACCTACA TCCTGGTCTC AAACGTGGCA | 100 |
AGATGACGCC TCAAGAAGAG CGCCTCGTCC TTGAGCTTCA CGCTAAGTGG | 150 |
GGAAACAGGT GGTCGAAAAT AGCCCGAAAA TTGCCGGGAC GAACGGATAA | 200 |
CGAGATAAAG AACTACTGGA GGACTCATAT GAGGAAGAAA GCTCAAGAAA | 250 |
AGAAGCGTCC TGTTTCCCCA ACTTCCTCAT TTTCCAACTG CAGCTCGTCA | 300 |
TCTGTGACCA CTACCACCAC CAATACTCAA GATACATCGT GCCACTCGCG | 350 |
TAAATCTTCA GGGGAAGTGA GCTTTTACGA CACTGGAGGT TCCCGATCCA | 400 |
CTAGAGAGAT GAATCAAGAA AACGAAGACG TGTACTCGTT GGATGATATA | 450 |
TGGAGAGAGA TTGATCACTC AGCAGTAAAC ATAATAAAAC CGGTTAAAGA | 500 |
CATCTACTCA GAACAAAGCC ATTGCTTAAG TTACCCAAAT CTAGCTTCAC | 550 |
CATCATGGGA AAGCTCATTG GATTCTATAT GGAACATGGA TGCAGATAAA | 600 |
AGTAAGATAT CGTCTTACTT TGCAAATGAT CAGTTTCCTT TCTGTTTCCA | 650 |
ACACAGTAGA TCACCATGGT CGTCAGGTTA A | 700 |
>AT3G46130.3 longest ORF length:226
MDRTGRHTSG LNRTGKSCRL RWVNYLHPGL KRGKMTPQEE RLVLELHAKW | 50 |
GNRWSKIARK LPGRTDNEIK NYWRTHMRKK AQEKKRPVSP TSSFSNCSSS | 100 |
SVTTTTTNTQ DTSCHSRKSS GEVSFYDTGG SRSTREMNQE NEDVYSLDDI | 150 |
WREIDHSAVN IIKPVKDIYS EQSHCLSYPN LASPSWESSL DSIWNMDADK | 200 |
SKISSYFAND QFPFCFQHSR SPWSSG | 250 |
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