fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G46600 GRAS family transcription factor (.1.2.3)

>AT3G46600.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 219, 277
HindIII A|AGCTT 1001
XbaI T|CTAGA 324


Click here to view TAIR data

>AT3G46600.1 length:1752
ATGGATGCTA TTTTGCCAGT ACCCGTTGAT GGGTTCAGAT TCGACACCGG 
50
TTCTGGATCT TGTTGCAAAC CGAGGAACAA TCTTGAATCT GGGACGACCA 
100
ATCGTTTCAC TTGTTTCAAC GAATCTGAAT CTCAGAGCAA CCCTTCTCCG 
150
ACCGAGTCTA AGGTATGTTC AGATTACCTT CCTGTCTTTA AGTACATCAA 
200
TGACATGTTG ATGGAAGAAG ATCTTGAAGG TCAGTCTTGT ATGTTGGAAG 
250
ACAGTTTGGC TTTACAAGCC GCAGAGAGAT CTTTCTTCGA AGTGCTTCAA 
300
GATCAAACTC CAATCTCGGG TGATCTAGAG GATGGTTCTC TTGGAAACTT 
350
CAGTTCTATA ACGAGTTTGC ATCAACCTGA AGTTTCAGAG GAGTCAACCA 
400
GAAGGTATCG ACATAGGGAT GATGATGAAG ATGATGATCT TGAGAGTGGA 
450
AGGAAATCGA AGCTCCCTGC GATTTCTACG GTGGATGAGT TAGCAGAGAA 
500
GTTTGAGGAA GTGTTGTTGG TATGTCAAAA GAATGATCAG GGAGAAGCAA 
550
CAGAGAAGAA AACAAGACAC GTAAAAGGCT CATCGAATCG ATACAAGCAG 
600
CAAAAGTCAG ATCAGCCAGT AGATATGAGG AATCTTTTGA TGCAATGCGC 
650
GCAAGCTGTG GCGAGTTTTG ACCAGAGAAG AGCTTTTGAG AAACTGAAGG 
700
AGATAAGAGA ACACTCTTCT CGCCACGGTG ATGCGACTCA AAGACTTGGT 
750
TATCACTTTG CTGAGGCGCT TGAAGCTCGT ATTACAGGAA CCATGACTAC 
800
ACCAATATCT GCTACTTCTA GCAGAACATC AATGGTGGAC ATTTTGAAGG 
850
CGTACAAGGG ATTTGTTCAG GCTTGCCCCA CCTTAATAAT GTGTTATTTC 
900
ACTGCAAACA GAACAATCAA TGAGCTTGCT TCCAAAGCAA CCACACTTCA 
950
CATCATTGAT TTTGGGATTC TCTATGGATT TCAATGGCCT TGTCTGATAC 
1000
AAGCTTTGTC AAAACGTGAC ATCGGACCAC CACTGCTCCG TGTGACTGGT 
1050
ATCGAGCTTC CTCAGTCAGG TTTCCGTCCA TCAGAGCGGG TAGAAGAGAC 
1100
CGGGCGAAGA CTAAAGAGGT TCTGTGACAA GTTCAATGTC CCGTTTGAGT 
1150
ACAGTTTCAT AGCCAAGAAT TGGGAGAACA TAACTCTTGA TGATCTGGTG 
1200
ATCAATAGTG GCGAGACAAC AGTTGTCAAC TGCATCCTCC GGCTACAATA 
1250
TACACCTGAT GAAACCGTGT CCCTCAACTC ACCGAGAGAC ACGGCTCTGA 
1300
AACTATTCAG AGACATCAAC CCTGACCTCT TTGTGTTTGC AGAGATTAAC 
1350
GGGACTTACA ATTCACCCTT CTTCCTAACA AGGTTCAGAG AAGCTCTCTT 
1400
CCATTGCTCG TCACTCTTTG ACATGTATGA GACCACATTA TCAGAAGACG 
1450
ACAATTGCAG GACACTGGTG GAGAGGGAAC TAATCATAAG AGATGCAATG 
1500
AGTGTGATAG CCTGTGAAGG GTCTGAGCGG TTTGCAAGGC CAGAGACCTA 
1550
CAAGCAATGG CAGGTTAGGA TTCTAAGAGC AGGATTTAGA CCAGCGAAAC 
1600
TAAGCAAACA GATAGTAAAG GACGGGAAAG AGATAGTGAA AGAACGTTAC 
1650
CACAAAGATT TTGTGATCGA CAATGATAAC CACTGGATGT TTCAGGGCTG 
1700
GAAAGGAAGA GTCCTTTATG CTGTTTCTTG CTGGAAACCT GCTAAGAAGT 
1750
AA
1800

>AT3G46600.1 longest ORF length:583
MDAILPVPVD GFRFDTGSGS CCKPRNNLES GTTNRFTCFN ESESQSNPSP 
50
TESKVCSDYL PVFKYINDML MEEDLEGQSC MLEDSLALQA AERSFFEVLQ 
100
DQTPISGDLE DGSLGNFSSI TSLHQPEVSE ESTRRYRHRD DDEDDDLESG 
150
RKSKLPAIST VDELAEKFEE VLLVCQKNDQ GEATEKKTRH VKGSSNRYKQ 
200
QKSDQPVDMR NLLMQCAQAV ASFDQRRAFE KLKEIREHSS RHGDATQRLG 
250
YHFAEALEAR ITGTMTTPIS ATSSRTSMVD ILKAYKGFVQ ACPTLIMCYF 
300
TANRTINELA SKATTLHIID FGILYGFQWP CLIQALSKRD IGPPLLRVTG 
350
IELPQSGFRP SERVEETGRR LKRFCDKFNV PFEYSFIAKN WENITLDDLV 
400
INSGETTVVN CILRLQYTPD ETVSLNSPRD TALKLFRDIN PDLFVFAEIN 
450
GTYNSPFFLT RFREALFHCS SLFDMYETTL SEDDNCRTLV ERELIIRDAM 
500
SVIACEGSER FARPETYKQW QVRILRAGFR PAKLSKQIVK DGKEIVKERY 
550
HKDFVIDNDN HWMFQGWKGR VLYAVSCWKP AKK
600