fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G46600 GRAS family transcription factor (.1.2.3)

>AT3G46600.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 611


Click here to view TAIR data

>AT3G46600.2 length:1362
ATGTCAACCA GAAGGTATCG ACATAGGGAT GATGATGAAG ATGATGATCT 
50
TGAGAGTGGA AGGAAATCGA AGCTCCCTGC GATTTCTACG GTGGATGAGT 
100
TAGCAGAGAA GTTTGAGGAA GTGTTGTTGG TATGTCAAAA GAATGATCAG 
150
GGAGAAGCAA CAGAGAAGAA AACAAGACAC GTAAAAGGCT CATCGAATCG 
200
ATACAAGCAG CAAAAGTCAG ATCAGCCAGT AGATATGAGG AATCTTTTGA 
250
TGCAATGCGC GCAAGCTGTG GCGAGTTTTG ACCAGAGAAG AGCTTTTGAG 
300
AAACTGAAGG AGATAAGAGA ACACTCTTCT CGCCACGGTG ATGCGACTCA 
350
AAGACTTGGT TATCACTTTG CTGAGGCGCT TGAAGCTCGT ATTACAGGAA 
400
CCATGACTAC ACCAATATCT GCTACTTCTA GCAGAACATC AATGGTGGAC 
450
ATTTTGAAGG CGTACAAGGG ATTTGTTCAG GCTTGCCCCA CCTTAATAAT 
500
GTGTTATTTC ACTGCAAACA GAACAATCAA TGAGCTTGCT TCCAAAGCAA 
550
CCACACTTCA CATCATTGAT TTTGGGATTC TCTATGGATT TCAATGGCCT 
600
TGTCTGATAC AAGCTTTGTC AAAACGTGAC ATCGGACCAC CACTGCTCCG 
650
TGTGACTGGT ATCGAGCTTC CTCAGTCAGG TTTCCGTCCA TCAGAGCGGG 
700
TAGAAGAGAC CGGGCGAAGA CTAAAGAGGT TCTGTGACAA GTTCAATGTC 
750
CCGTTTGAGT ACAGTTTCAT AGCCAAGAAT TGGGAGAACA TAACTCTTGA 
800
TGATCTGGTG ATCAATAGTG GCGAGACAAC AGTTGTCAAC TGCATCCTCC 
850
GGCTACAATA TACACCTGAT GAAACCGTGT CCCTCAACTC ACCGAGAGAC 
900
ACGGCTCTGA AACTATTCAG AGACATCAAC CCTGACCTCT TTGTGTTTGC 
950
AGAGATTAAC GGGACTTACA ATTCACCCTT CTTCCTAACA AGGTTCAGAG 
1000
AAGCTCTCTT CCATTGCTCG TCACTCTTTG ACATGTATGA GACCACATTA 
1050
TCAGAAGACG ACAATTGCAG GACACTGGTG GAGAGGGAAC TAATCATAAG 
1100
AGATGCAATG AGTGTGATAG CCTGTGAAGG GTCTGAGCGG TTTGCAAGGC 
1150
CAGAGACCTA CAAGCAATGG CAGGTTAGGA TTCTAAGAGC AGGATTTAGA 
1200
CCAGCGAAAC TAAGCAAACA GATAGTAAAG GACGGGAAAG AGATAGTGAA 
1250
AGAACGTTAC CACAAAGATT TTGTGATCGA CAATGATAAC CACTGGATGT 
1300
TTCAGGGCTG GAAAGGAAGA GTCCTTTATG CTGTTTCTTG CTGGAAACCT 
1350
GCTAAGAAGT AA
1400

>AT3G46600.2 longest ORF length:453
MSTRRYRHRD DDEDDDLESG RKSKLPAIST VDELAEKFEE VLLVCQKNDQ 
50
GEATEKKTRH VKGSSNRYKQ QKSDQPVDMR NLLMQCAQAV ASFDQRRAFE 
100
KLKEIREHSS RHGDATQRLG YHFAEALEAR ITGTMTTPIS ATSSRTSMVD 
150
ILKAYKGFVQ ACPTLIMCYF TANRTINELA SKATTLHIID FGILYGFQWP 
200
CLIQALSKRD IGPPLLRVTG IELPQSGFRP SERVEETGRR LKRFCDKFNV 
250
PFEYSFIAKN WENITLDDLV INSGETTVVN CILRLQYTPD ETVSLNSPRD 
300
TALKLFRDIN PDLFVFAEIN GTYNSPFFLT RFREALFHCS SLFDMYETTL 
350
SEDDNCRTLV ERELIIRDAM SVIACEGSER FARPETYKQW QVRILRAGFR 
400
PAKLSKQIVK DGKEIVKERY HKDFVIDNDN HWMFQGWKGR VLYAVSCWKP 
450
AKK
500