fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G46600 GRAS family transcription factor (.1.2.3)

>AT3G46600.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 181
HindIII A|AGCTT 905
XbaI T|CTAGA 228


Click here to view TAIR data

>AT3G46600.3 length:1656
ATGCTATTTT GCCAGTACCC GTTGATGGGT TCAGATTCGA CACCGGTTCT 
50
GGATCTTGTT GCAAACCGAG GAACAATCTT GAATCTGGGA CGACCAATCG 
100
TTTCACTTGT TTCAACGAAT CTGAATCTCA GAGCAACCCT TCTCCGACCG 
150
AGTCTAAGTT TGGCTTTACA AGCCGCAGAG AGATCTTTCT TCGAAGTGCT 
200
TCAAGATCAA ACTCCAATCT CGGGTGATCT AGAGGATGGT TCTCTTGGAA 
250
ACTTCAGTTC TATAACGAGT TTGCATCAAC CTGAAGTTTC AGAGGAGTCA 
300
ACCAGAAGGT ATCGACATAG GGATGATGAT GAAGATGATG ATCTTGAGAG 
350
TGGAAGGAAA TCGAAGCTCC CTGCGATTTC TACGGTGGAT GAGTTAGCAG 
400
AGAAGTTTGA GGAAGTGTTG TTGGTATGTC AAAAGAATGA TCAGGGAGAA 
450
GCAACAGAGA AGAAAACAAG ACACGTAAAA GGCTCATCGA ATCGATACAA 
500
GCAGCAAAAG TCAGATCAGC CAGTAGATAT GAGGAATCTT TTGATGCAAT 
550
GCGCGCAAGC TGTGGCGAGT TTTGACCAGA GAAGAGCTTT TGAGAAACTG 
600
AAGGAGATAA GAGAACACTC TTCTCGCCAC GGTGATGCGA CTCAAAGACT 
650
TGGTTATCAC TTTGCTGAGG CGCTTGAAGC TCGTATTACA GGAACCATGA 
700
CTACACCAAT ATCTGCTACT TCTAGCAGAA CATCAATGGT GGACATTTTG 
750
AAGGCGTACA AGGGATTTGT TCAGGCTTGC CCCACCTTAA TAATGTGTTA 
800
TTTCACTGCA AACAGAACAA TCAATGAGCT TGCTTCCAAA GCAACCACAC 
850
TTCACATCAT TGATTTTGGG ATTCTCTATG GATTTCAATG GCCTTGTCTG 
900
ATACAAGCTT TGTCAAAACG TGACATCGGA CCACCACTGC TCCGTGTGAC 
950
TGGTATCGAG CTTCCTCAGT CAGGTTTCCG TCCATCAGAG CGGGTAGAAG 
1000
AGACCGGGCG AAGACTAAAG AGGTTCTGTG ACAAGTTCAA TGTCCCGTTT 
1050
GAGTACAGTT TCATAGCCAA GAATTGGGAG AACATAACTC TTGATGATCT 
1100
GGTGATCAAT AGTGGCGAGA CAACAGTTGT CAACTGCATC CTCCGGCTAC 
1150
AATATACACC TGATGAAACC GTGTCCCTCA ACTCACCGAG AGACACGGCT 
1200
CTGAAACTAT TCAGAGACAT CAACCCTGAC CTCTTTGTGT TTGCAGAGAT 
1250
TAACGGGACT TACAATTCAC CCTTCTTCCT AACAAGGTTC AGAGAAGCTC 
1300
TCTTCCATTG CTCGTCACTC TTTGACATGT ATGAGACCAC ATTATCAGAA 
1350
GACGACAATT GCAGGACACT GGTGGAGAGG GAACTAATCA TAAGAGATGC 
1400
AATGAGTGTG ATAGCCTGTG AAGGGTCTGA GCGGTTTGCA AGGCCAGAGA 
1450
CCTACAAGCA ATGGCAGGTT AGGATTCTAA GAGCAGGATT TAGACCAGCG 
1500
AAACTAAGCA AACAGATAGT AAAGGACGGG AAAGAGATAG TGAAAGAACG 
1550
TTACCACAAA GATTTTGTGA TCGACAATGA TAACCACTGG ATGTTTCAGG 
1600
GCTGGAAAGG AAGAGTCCTT TATGCTGTTT CTTGCTGGAA ACCTGCTAAG 
1650
AAGTAA
1700

>AT3G46600.3 longest ORF length:551
MLFCQYPLMG SDSTPVLDLV ANRGTILNLG RPIVSLVSTN LNLRATLLRP 
50
SLSLALQAAE RSFFEVLQDQ TPISGDLEDG SLGNFSSITS LHQPEVSEES 
100
TRRYRHRDDD EDDDLESGRK SKLPAISTVD ELAEKFEEVL LVCQKNDQGE 
150
ATEKKTRHVK GSSNRYKQQK SDQPVDMRNL LMQCAQAVAS FDQRRAFEKL 
200
KEIREHSSRH GDATQRLGYH FAEALEARIT GTMTTPISAT SSRTSMVDIL 
250
KAYKGFVQAC PTLIMCYFTA NRTINELASK ATTLHIIDFG ILYGFQWPCL 
300
IQALSKRDIG PPLLRVTGIE LPQSGFRPSE RVEETGRRLK RFCDKFNVPF 
350
EYSFIAKNWE NITLDDLVIN SGETTVVNCI LRLQYTPDET VSLNSPRDTA 
400
LKLFRDINPD LFVFAEINGT YNSPFFLTRF REALFHCSSL FDMYETTLSE 
450
DDNCRTLVER ELIIRDAMSV IACEGSERFA RPETYKQWQV RILRAGFRPA 
500
KLSKQIVKDG KEIVKERYHK DFVIDNDNHW MFQGWKGRVL YAVSCWKPAK 
550
K
600