fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G47500 CDF3, AtDof3,3 cycling DOF factor 3 (.1)

>AT3G47500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 748
HindIII A|AGCTT 31
NcoI C|CATGG 880
SacI GAGCT|C 1167
SmaI CCC|GGG 552
StyI C|C[AT][AT]GG 215, 880


Click here to view TAIR data

>AT3G47500.1 length:1347
ATGATGATGG AGACTAGAGA TCCAGCTATT AAGCTTTTCG GTATGAAAAT 
50
CCCTTTTCCG TCGGTTTTTG AATCGGCAGT TACGGTGGAG GATGACGAAG 
100
AAGATGACTG GAGCGGCGGA GATGACAAAT CACCAGAGAA GGTAACTCCA 
150
GAGTTATCAG ATAAGAACAA CAACAACTGT AACGACAACA GTTTTAACAA 
200
TTCGAAACCC GAAACCTTGG ACAAAGAGGA AGCGACATCA ACTGATCAGA 
250
TAGAGAGTAG TGACACGCCT GAGGATAATC AGCAGACGAC ACCTGATGGT 
300
AAAACCCTAA AGAAACCGAC TAAGATTCTA CCGTGTCCGA GATGCAAAAG 
350
CATGGAGACC AAGTTCTGTT ATTACAACAA CTACAACATA AACCAGCCTC 
400
GTCATTTCTG CAAGGCTTGT CAGAGATATT GGACTGCTGG AGGGACTATG 
450
AGGAATGTTC CTGTGGGGGC AGGACGTCGT AAGAACAAAA GCTCATCTTC 
500
TCATTACCGT CACATCACTA TTTCCGAGGC TCTTGAGGCT GCGAGGCTTG 
550
ACCCGGGCTT ACAGGCAAAC ACAAGGGTCT TGAGTTTTGG TCTCGAAGCT 
600
CAGCAGCAGC ACGTTGCTGC TCCCATGACA CCTGTGATGA AGCTACAAGA 
650
AGATCAAAAG GTCTCAAACG GTGCTAGGAA CAGGTTTCAC GGGTTAGCGG 
700
ATCAACGGCT TGTAGCTCGG GTAGAGAATG GAGATGATTG CTCAAGCGGA 
750
TCCTCTGTGA CCACCTCTAA CAATCACTCA GTGGATGAAT CAAGAGCACA 
800
AAGCGGCAGT GTTGTTGAAG CACAAATGAA CAACAACAAC AACAATAACA 
850
TGAATGGTTA TGCTTGCATC CCAGGTGTTC CATGGCCTTA CACGTGGAAT 
900
CCAGCGATGC CTCCACCAGG TTTTTACCCG CCTCCAGGGT ATCCAATGCC 
950
GTTTTACCCT TACTGGACCA TCCCAATGCT ACCACCGCAT CAATCCTCAT 
1000
CGCCTATAAG CCAAAAGTGT TCAAATACAA ACTCTCCGAC TCTCGGAAAG 
1050
CATCCGAGAG ATGAAGGATC ATCGAAAAAG GACAACGAGA CAGAGCGAAA 
1100
ACAGAAGGCC GGGTGCGTTC TGGTCCCGAA AACGTTGAGA ATAGATGATC 
1150
CTAACGAAGC AGCAAAGAGC TCGATATGGA CAACATTGGG AATCAAGAAC 
1200
GAGGCGATGT GCAAAGCCGG TGGTATGTTC AAAGGGTTTG ATCATAAGAC 
1250
AAAGATGTAT AACAACGACA AAGCTGAGAA CTCCCCTGTT CTTTCTGCTA 
1300
ACCCTGCTGC TCTATCAAGA TCACACAATT TCCATGAACA GATTTAG
1350

>AT3G47500.1 longest ORF length:448
MMMETRDPAI KLFGMKIPFP SVFESAVTVE DDEEDDWSGG DDKSPEKVTP 
50
ELSDKNNNNC NDNSFNNSKP ETLDKEEATS TDQIESSDTP EDNQQTTPDG 
100
KTLKKPTKIL PCPRCKSMET KFCYYNNYNI NQPRHFCKAC QRYWTAGGTM 
150
RNVPVGAGRR KNKSSSSHYR HITISEALEA ARLDPGLQAN TRVLSFGLEA 
200
QQQHVAAPMT PVMKLQEDQK VSNGARNRFH GLADQRLVAR VENGDDCSSG 
250
SSVTTSNNHS VDESRAQSGS VVEAQMNNNN NNNMNGYACI PGVPWPYTWN 
300
PAMPPPGFYP PPGYPMPFYP YWTIPMLPPH QSSSPISQKC SNTNSPTLGK 
350
HPRDEGSSKK DNETERKQKA GCVLVPKTLR IDDPNEAAKS SIWTTLGIKN 
400
EAMCKAGGMF KGFDHKTKMY NNDKAENSPV LSANPAALSR SHNFHEQI
450