Locus |
Common name |
Short description |
AT3G47870 |
ASL29, SCP, LBD27 |
SIDECAR POLLEN, ASYMMETRIC LEAVES 2-like 29, LOB domain-containing protein 27 (.1) |
>AT3G47870.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
48 |
EcoRV
| GAT|ATC |
940 |
HpaI
| GTT|AAC |
556, 661 |
PstI
| CTGCA|G |
651 |
Click here to view TAIR data
>AT3G47870.1 length:987
ATGAGCAATA CAAAACACAT CCACAAAGGG TTACAGGAGA GGCTTTTAGA | 50 |
TCTTCTCTTG ATCGCTCTTA TAGTTTACAT GACTCTTAAA GGCGGCACGA | 100 |
GTGGGGCTTG TGCCGCGTGC AAGTACCAAC GTAGACGCTG CGCCGCGGAC | 150 |
TGCCCCCTCG CGCCTTACTT CCCAGCCGAA CAACCGAAAC TTTTCCAAAA | 200 |
CGTTCACAGG CTATTCGGCG TAAGAAGTAT CGTCAAGATC CTCGAAAAAC | 250 |
TAGACGAAAC TCAGAAACCA GAAGCAATGA AATCAATCAT CTTCCAGTCT | 300 |
TATGTCCGTG ACCGTTCTCC TGTCCACGGT TGCCTCGGCG TCACGCAACA | 350 |
ACTTCAATAC ATGATCTGGT TTGCTGAAGA AGAACTCAAA GCTGTCAATT | 400 |
CTCAATTACA ACTATATCGC TCTCAACCAC AAAACGGTCA AAATCAAAAC | 450 |
CAAAACCATA ATCATAATCA GATGATTCAT GAGCTTGGTA GTGATCATAA | 500 |
TAAGCAGCAA GAAGATGTTA CATCGCAGCA GCTTGACTTG GGTATGGGAC | 550 |
TTAACGTTAA CAATAATCAG AGCAATGTCG TTACACCATT CTTTAGTTCA | 600 |
TTATTACCAG TTTCCGAAAC ACAACAGCCA CAAATGTCTT ACACTTATAG | 650 |
CTGCAGTGAG GTTAACAACA ATGGCTATAG TCCTCCTGCT TATAATACAG | 700 |
ATTCGGGCAA GGAGATTCTG ACCAACAATA ACAATGTTTG GGGTGATCAG | 750 |
AATCGATTTC TGTATAACAA CAACAATGGA GGAGGATACA GCAACCAAAA | 800 |
CGAGAGCTGT CATGAGATGA AGAGTAACGG TGTAATGGCA ATACAATCAC | 850 |
AGCTCGTAAA TCTGCAAATG GTATCAAATC ATCAGCGAGT GGAAGAAGAA | 900 |
GAAGCTGATC ATGAATACGA TGAACTCCAT CAGTTTCTTG ATATCATTGA | 950 |
CGATAGGCAA TCATTTGGGG ATTCTAAAGA AGCGTAG | 1000 |
>AT3G47870.1 longest ORF length:328
MSNTKHIHKG LQERLLDLLL IALIVYMTLK GGTSGACAAC KYQRRRCAAD | 50 |
CPLAPYFPAE QPKLFQNVHR LFGVRSIVKI LEKLDETQKP EAMKSIIFQS | 100 |
YVRDRSPVHG CLGVTQQLQY MIWFAEEELK AVNSQLQLYR SQPQNGQNQN | 150 |
QNHNHNQMIH ELGSDHNKQQ EDVTSQQLDL GMGLNVNNNQ SNVVTPFFSS | 200 |
LLPVSETQQP QMSYTYSCSE VNNNGYSPPA YNTDSGKEIL TNNNNVWGDQ | 250 |
NRFLYNNNNG GGYSNQNESC HEMKSNGVMA IQSQLVNLQM VSNHQRVEEE | 300 |
EADHEYDELH QFLDIIDDRQ SFGDSKEA | 350 |
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