fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G48160 E2FE, E2L3, DEL1 E2F-LIKE 3, DP-E2F-like 1 (.1.2)

>AT3G48160.2 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 6
HindIII A|AGCTT 942


Click here to view TAIR data

>AT3G48160.2 length:1212
ATGTCAGATC TATCGCCAGA AAGATTCAAA CTTGCCGTTA CTTCTCCTTC 
50
TTCCATACCG GAATCTTCTT CGGCTTTACA ATTACACCAT TCCTATAGTC 
100
GCAAACAGAA ATCTCTCGGA CTTCTTTGTA CCAATTTCTT AGCTTTGTAT 
150
AATCGAGAAG GGATTGAAAT GGTTGGGCTT GATGATGCTG CCTCGAAATT 
200
AGGAGTGGAG AGACGAAGAA TCTATGATAT TGTTAATGTT CTGGAGAGTG 
250
TTGGGGTTTT AACAAGAAGA GCAAAGAATC AGTATACGTG GAAAGGGTTT 
300
TCCGCAATTC CAGGAGCATT GAAGGAGCTA CAAGAAGAGG GGGTTAAGGA 
350
CACTTTTCAT CGTTTCTATG TCAATGAGAA TGTTAAAGGA TCTGATGATG 
400
AGGATGATGA TGAAGAGTCT TCTCAGCCTC ACTCTAGTAG CCAGACTGAT 
450
AGTTCAAAAC CTGGTTCTCT TCCCCAATCT TCAGATCCCT CCAAAATAGA 
500
TAACCGACGA GAGAAATCTT TAGGATTGCT TACTCAGAAC TTTATCAAAC 
550
TCTTTATTTG CTCTGAAGCT ATTAGGATCA TCTCCCTTGA TGACGCTGCA 
600
AAATTACTGC TTGGTGATGC CCACAATACA TCAATAATGC GAACTAAAGT 
650
GAGGCGGCTT TATGATATAG CAAATGTCTT GTCGTCAATG AATCTCATAG 
700
AGAAGACTCA CACCTTAGAT TCTAGGAAAC CAGCTTTCAA GTGGTTAGGG 
750
TACAATGGTG AGCCTACTTT CACACTGAGC AGCGATTTGT TGCAATTGGA 
800
GTCAAGAAAA AGAGCTTTCG GAACTGATAT TACAAACGTC AATGTTAAGA 
850
GAAGCAAATC ATCATCTTCG TCCCAAGAAA ACGCTACAGA GAGAAGGCTA 
900
AAGATGAAAA AGCACTCAAC ACCAGAGAGT TCTTATAACA AAAGCTTTGA 
950
TGTTCATGAA TCAAGACATG GATCAAGAGG AGGTTACCAT TTTGGACCTT 
1000
TTGCACCAGG CACTGGTACA TATCCAACTG CTGGTTTAGA GGATAACTCT 
1050
AGGAGAGCTT TTGATGTTGA GAATCTGGAT TCTGATTACC GTCCCTCTTA 
1100
CCAAAACCAA GTTTTGAAAG ACCTCTTTTC CCATTACATG GATGCTTGGA 
1150
AGACATGGTT CAGCGAAGTC ACCCAGGAGA ATCCATTACC TAATACATCA 
1200
CAACACCGTT AG
1250

>AT3G48160.2 longest ORF length:403
MSDLSPERFK LAVTSPSSIP ESSSALQLHH SYSRKQKSLG LLCTNFLALY 
50
NREGIEMVGL DDAASKLGVE RRRIYDIVNV LESVGVLTRR AKNQYTWKGF 
100
SAIPGALKEL QEEGVKDTFH RFYVNENVKG SDDEDDDEES SQPHSSSQTD 
150
SSKPGSLPQS SDPSKIDNRR EKSLGLLTQN FIKLFICSEA IRIISLDDAA 
200
KLLLGDAHNT SIMRTKVRRL YDIANVLSSM NLIEKTHTLD SRKPAFKWLG 
250
YNGEPTFTLS SDLLQLESRK RAFGTDITNV NVKRSKSSSS SQENATERRL 
300
KMKKHSTPES SYNKSFDVHE SRHGSRGGYH FGPFAPGTGT YPTAGLEDNS 
350
RRAFDVENLD SDYRPSYQNQ VLKDLFSHYM DAWKTWFSEV TQENPLPNTS 
400
QHR
450