|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G48920 | ATMYB45 | myb domain protein 45 (.1) |
>AT3G48920.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 451 |
| EcoRV | GAT|ATC | 291, 702 |
| HindIII | A|AGCTT | 88, 501 |
| NcoI | C|CATGG | 117 |
| StyI | C|C[AT][AT]GG | 117 |
Click here to view TAIR data
>AT3G48920.1 length:786
ATGGTGTTTA AATCAGAAAA ATCAAACCGG GAAATGAAAT CAAAGGAGAA | 50 |
GCAAAGGAAG GGATTATGGT CACCCGAGGA AGATGAGAAG CTTAGGAGTC | 100 |
ATGTCCTCAA ATATGGCCAT GGATGCTGGA GTACTATTCC TCTTCAAGCT | 150 |
GGATTGCAGA GGAATGGGAA GAGTTGTAGA TTAAGGTGGG TTAATTATTT | 200 |
AAGACCTGGA CTTAAGAAGT CTTTATTCAC TAAACAAGAG GAAACTATAC | 250 |
TTCTTTCACT TCATTCCATG TTGGGTAACA AATGGTCTCA GATATCGAAA | 300 |
TTCTTACCAG GAAGAACCGA CAACGAGATC AAAAACTATT GGCATTCTAA | 350 |
TCTAAAGAAG GGTGTAACTT TGAAACAACA TGAAACCACA AAAAAACATC | 400 |
AAACACCTTT AATCACAAAC TCACTTGAGG CCTTGCAGAG TTCAACTGAA | 450 |
AGATCTTCTT CATCTATCAA TGTCGGAGAA ACGTCTAATG CTCAAACCTC | 500 |
AAGCTTTTCG CCAAATCTCG TGTTCTCGGA ATGGTTAGAT CATAGTTTGC | 550 |
TTATGGATCA GTCACCTCAA AAGTCTAGCT ATGTTCAAAA TCTTGTTTTA | 600 |
CCGGAAGAGA GAGGATTCAT TGGACCATGT GGCCCTCGTT ATTTGGGAAA | 650 |
CGACTCTTTG CCTGATTTCG TGCCAAATTC AGAATTTTTG TTGGATGATG | 700 |
AGATATCATC TGAGATCGAG TTCTGTACTT CATTTTCAGA CAACTTTTTG | 750 |
TTCGATGGTC TCATCAACGA GCTACGACCA ATGTAA | 800 |
>AT3G48920.1 longest ORF length:261
MVFKSEKSNR EMKSKEKQRK GLWSPEEDEK LRSHVLKYGH GCWSTIPLQA | 50 |
GLQRNGKSCR LRWVNYLRPG LKKSLFTKQE ETILLSLHSM LGNKWSQISK | 100 |
FLPGRTDNEI KNYWHSNLKK GVTLKQHETT KKHQTPLITN SLEALQSSTE | 150 |
RSSSSINVGE TSNAQTSSFS PNLVFSEWLD HSLLMDQSPQ KSSYVQNLVL | 200 |
PEERGFIGPC GPRYLGNDSL PDFVPNSEFL LDDEISSEIE FCTSFSDNFL | 250 |
FDGLINELRP M | 300 |