fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G49850 TBP2, TRB3, ATTRB3 TELOMERE-BINDING PROTEIN 2, telomere repeat binding factor 3 (.1)

>AT3G49850.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 205
PstI CTGCA|G 329, 722
PvuII CAG|CTG 728
SacI GAGCT|C 5


Click here to view TAIR data

>AT3G49850.1 length:888
ATGGGAGCTC CAAAGCTGAA GTGGACACCA GAAGAAGAAA CAGCTCTTAA 
50
AGCTGGAGTA CTTAAACATG GAACTGGAAA ATGGCGTACC ATTCTCTCAG 
100
ATCCTGTGTA TAGCACAATT CTGAAGTCTC GTTCTAATGT GGATCTCAAG 
150
GACAAATGGA GAAATATAAG TGTAACAGCT TTATGGGGAT CTAGGAAGAA 
200
GGCTAAGCTT GCTCTTAAAA GAACTCCTTT GTCGGGTAGT AGGCAAGACG 
250
ATAACGCTAC AGCTATTACC ATTGTGTCTT TAGCTAATGG TGATGTAGGA 
300
GGACAACAGA TTGATGCACC ATCTCCTCCT GCAGGTTCTT GTGAACCTCC 
350
AAGACCTTCT ACAAGTGTGG ATAAGATTAT ATTGGAGGCT ATTACCAGCT 
400
TGAAGAGACC ATTTGGTCCT GACGGAAAGT CGATCTTGAT GTATATAGAG 
450
GAGAATTTCA AGATGCAACC GGATATGAAA CGGCTTGTGA CTTCAAGGCT 
500
GAAGTATTTG ACAAATGTTG GAACATTAGT TAAGAAAAAG CACAAATACA 
550
GGATTTCTCA GAATTATATG GCTGAAGGAG AAGGACAAAG GTCTCCTCAA 
600
CTCTTGTTGG AAGGAAACAA GGAAAACACT CCGAAACCGG AGGAGAATGG 
650
CGTCAAAAAT CTTACTAAAT CCCAAGTAGG TGGAGAAGTT ATGATAATGG 
700
GTATGACAGA AAAAGAAGCT GCTGCAGCAG CTGCAAGAGC TGTGGCAGAA 
750
GCAGAATTTG CAATGGCAGA AGCTGAAGAA GCAGCAAGAG AGGCAGATAA 
800
AGCAGAAGCC GAAGCTGAAG CTGCCCATAT TTTTGCAAAA GCGGCGATGA 
850
AAGCTGTGAA GTATAGAATG CATAGCCAAA CTCGGTAA
900

>AT3G49850.1 longest ORF length:295
MGAPKLKWTP EEETALKAGV LKHGTGKWRT ILSDPVYSTI LKSRSNVDLK 
50
DKWRNISVTA LWGSRKKAKL ALKRTPLSGS RQDDNATAIT IVSLANGDVG 
100
GQQIDAPSPP AGSCEPPRPS TSVDKIILEA ITSLKRPFGP DGKSILMYIE 
150
ENFKMQPDMK RLVTSRLKYL TNVGTLVKKK HKYRISQNYM AEGEGQRSPQ 
200
LLLEGNKENT PKPEENGVKN LTKSQVGGEV MIMGMTEKEA AAAAARAVAE 
250
AEFAMAEAEE AAREADKAEA EAEAAHIFAK AAMKAVKYRM HSQTR
300