fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G49930 C2H2 and C2HC zinc fingers superfamily protein (.1)

>AT3G49930.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions


Click here to view TAIR data

>AT3G49930.1 length:648
ATGGCTCTCG ACACTCTCAA TTCTCCCACC TCCACCACCA CAACCACCGC 
50
TCCTCCTCCT TTCCTCCGTT GCCTCGACGA AACCGAGCCC GAAAACCTCG 
100
AATCATGGAC CAAAAGAAAA CGTACAAAAC GTCACCGTAT AGATCAACCA 
150
AACCCTCCTC CTTCTGAAGA AGAGTATCTC GCTCTTTGCC TCCTTATGCT 
200
CGCTCGTGGC TCCTCCGATC ATCACTCTCC ACCGTCGGAT CATCACTCTC 
250
TTTCTCCACT GTCCGATCAT CAGAAAGATT ACAAGTGTTC CGTCTGTGGC 
300
AAATCTTTCC CGTCTTACCA AGCGTTAGGT GGACACAAAA CAAGTCACCG 
350
GAAACCGGTT AGTGTCGATG TTAATAATAG TAACGGAACC GTTACTAATA 
400
ACGGAAATAT TAGTAACGGT TTAGTTGGTC AAAGTGGGAA GACTCATAAC 
450
TGCTCTATAT GTTTTAAGTC GTTTCCCTCT GGTCAAGCAT TGGGTGGTCA 
500
CAAACGTTGT CACTATGATG GTGGTAACGG TAACAGTAAC GGTGACAATA 
550
GCCACAAGTT TGACCTAAAT TTACCGGCTG ATCAAGTTAG TGATGAGACA 
600
ATTGGAAAAA GTCAACTCTC CGGTGAAGAA ACAAAGTCGG TGTTGTGA
650

>AT3G49930.1 longest ORF length:215
MALDTLNSPT STTTTTAPPP FLRCLDETEP ENLESWTKRK RTKRHRIDQP 
50
NPPPSEEEYL ALCLLMLARG SSDHHSPPSD HHSLSPLSDH QKDYKCSVCG 
100
KSFPSYQALG GHKTSHRKPV SVDVNNSNGT VTNNGNISNG LVGQSGKTHN 
150
CSICFKSFPS GQALGGHKRC HYDGGNGNSN GDNSHKFDLN LPADQVSDET 
200
IGKSQLSGEE TKSVL
250