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| Locus | Common name | Short description |
| AT3G49940 | LBD38 | LOB domain-containing protein 38 (.1) |
>AT3G49940.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiHKAI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, Cac8I, ClaI, DraIII, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MwoI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SmaI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, Tth111I, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AciI | C|CGC | 156, 506 |
| AluI | AG|CT | 88, 208, 333, 385, 424, 473, 499, 552 |
| BfaI | C|TAG | 477, 483 |
| BglII | A|GATCT | 395, 481 |
| BsaAI | PyAC|GTPu | 682 |
| BsaBI | GATNN|NNATC | 486 |
| BsaJI | C|CNNGG | 644 |
| BsaWI | [AT]|CCGG[AT] | 165, 231, 330, 436 |
| BsiEI | CGPuPy|CG | 129 |
| BsiWI | C|GTACG | 684 |
| BslI | CCNNNNN|NNGG | 237, 442, 676 |
| BsrDI | GCAATGNN| | 10 |
| BsrFI | Pu|CCGGPy | 136, 670 |
| BssKI | |CCNGG | 358 |
| BstYI | Pu|GATCPy | 395, 481 |
| BtgI | C|CPuPyGG | 644 |
| BtsI | GCAGTGNN| | 40 |
| Cfr10I | [AG]|CCGG[TC] | 136, 670 |
| DdeI | C|TNAG | 118 |
| DpnI | GA-CH3|TC | 73, 394, 440, 480, 486, 492, 557, 674 |
| DpnII | |GATC | 73, 394, 440, 480, 486, 492, 557, 674 |
| DraI | TTT|AAA | 318 |
| EaeI | Py|GGCCPu | 129 |
| EagI | C|GGCCG | 129 |
| Fnu4HI | GC|NGC | 285, 688 |
| HaeIII | GG|CC | 95, 128 |
| HindIII | A|AGCTT | 209, 386 |
| HinfI | G|ANTC | 78, 168, 227, 352, 413, 432, 466, 633 |
| HpaII | C|CGG | 135, 164, 230, 329, 357, 435, 669 |
| Hpy188I | TCN|GA | 247, 378, 390, 443, 531, 549, 581, 627 |
| Hpy99I | CG[AT]CG| | 113, 245, 380, 529, 547, 616 |
| HpyCH4III | ACN|GT | 105, 222, 297, 614, 645 |
| HpyCH4IV | A|CGT | 681 |
| HpyCH4V | TG|CA | 5, 35, 47 |
| MboI | |GATC | 73, 394, 440, 480, 486, 492, 557, 674 |
| MseI | T|TAA | 140, 317, 339, 585, 600 |
| MspI | C|CGG | 135, 164, 230, 329, 357, 435, 669 |
| N.BstNBI | GAGTCNNNN|N | 638 |
| NciI | CC|[CG]GG | 358 |
| NlaIII | CATG| | 60 |
| NlaIV | GGN|NCC | 241 |
| RsaI | GT|AC | 161, 399, 622, 679, 683 |
| Sau3AI | |GATC | 73, 394, 440, 480, 486, 492, 557, 674 |
| ScrFI | CC|NGG | 358 |
| SgrAI | CPu|CCGGPyG | 671 |
| SmlI | C|TPyPuAG | 92, 471 |
| SnaBI | TAC|GTA | 682 |
| Taqƒ¿I | T|CGA | 16, 75, 617 |
| TfiI | G|A[AT]TC | 78, 168, 227, 352, 413, 432, 466 |
| TseI | G|C[AT]GC | 688 |
| Tsp509I | |AATT | 44, 266 |
| TspRI | NNCA[CG]TGNN| | 40, 461 |
| XbaI | T|CTAGA | 478, 484 |
| XcmI | CCANNNNN|NNNNTGG | 70 |
Click here to view TAIR data
>AT3G49940.1 length:744
ATGAGTTGCA ATGGTTGTCG AGTTCTACGA AAAGGTTGCA GTGAGAATTG | 50 |
CATCCTCCGT CCATGTATTC AATGGATCGA ATCACCTGAA GCTCAAGGCC | 100 |
ACGCCACCGT CTTCGTCGCT AAGTTCTTCG GCCGTGCCGG TTTAATGTCT | 150 |
TTCATCTCCG CCGTACCGGA ATCTCAATGC CCTGCTTTGT TTCAGTCTTT | 200 |
GCTATACGAA GCTTGTGGGA GAACTGTGAA TCCGGTGAAC GGAGCCGTCG | 250 |
GATTGTTGTG GACGGGGAAT TGGAATGTTT GTCAAGCGGC GGTTGAGACG | 300 |
GTGCTTCGTG GTGGTTCTTT AAAACCAATA CCGGAGCTTC TTAACGGCGG | 350 |
TGGATTCGCC GGGTTTCCGT CTCCTACTTC CGACGAAGCT TCGGAGATCT | 400 |
GTACGGAAAT GTTGAATCTA CGAAAAGCTG ATGATTCCGG TGATCGGAAC | 450 |
ATTTATCATC ACTGCCGATT CTCAAGCTCT AGATCTAGAT CAAGATCAAC | 500 |
AGCTTCTCCG CCGAAACGGA AACGATTATC GTCGGAACAA CAACCTTCGT | 550 |
CGGAGCTTGA TCTCTCTCTT ATTCCTATTT ATCCGATTAA AACCTTGCCG | 600 |
TTTAAGGAAG ATACACCGTC GATGTACTCG GAGGAGTCTG TTACCACGGT | 650 |
TTCGTTTCAA AACAACAACG CCGGTGATCG GTACGTACGC TGCGGCGGAG | 700 |
GAGGAGGAGG AGCAACGACA AAGTTGCTCA ATCTCTTCGC TTGA | 750 |
>AT3G49940.1 longest ORF length:247
MSCNGCRVLR KGCSENCILR PCIQWIESPE AQGHATVFVA KFFGRAGLMS | 50 |
FISAVPESQC PALFQSLLYE ACGRTVNPVN GAVGLLWTGN WNVCQAAVET | 100 |
VLRGGSLKPI PELLNGGGFA GFPSPTSDEA SEICTEMLNL RKADDSGDRN | 150 |
IYHHCRFSSS RSRSRSTASP PKRKRLSSEQ QPSSELDLSL IPIYPIKTLP | 200 |
FKEDTPSMYS EESVTTVSFQ NNNAGDRYVR CGGGGGGATT KLLNLFA | 250 |