fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G50060 ATMYB77 myb domain protein 77 (.1)

>AT3G50060.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 597
BglII A|GATCT 388
NcoI C|CATGG 22
PvuII CAG|CTG 514
StyI C|C[AT][AT]GG 22


Click here to view TAIR data

>AT3G50060.1 length:906
ATGGCGGATC GTGTTAAAGG TCCATGGAGT CAAGAAGAAG ATGAGCAGCT 
50
ACGAAGGATG GTTGAGAAAT ACGGACCGAG GAATTGGTCT GCGATTAGCA 
100
AATCGATTCC AGGTCGATCT GGTAAATCGT GTAGATTACG TTGGTGTAAT 
150
CAGTTATCTC CGGAGGTTGA GCATCGTCCT TTCTCGCCGG AGGAAGATGA 
200
GACTATTGTA ACCGCCCGTG CTCAGTTTGG TAACAAGTGG GCGACGATTG 
250
CTCGTCTTCT TAACGGTCGT ACGGATAACG CCGTTAAAAA TCACTGGAAC 
300
TCTACGCTTA AGAGGAAATG CAGCGGAGGT GTGGCGGTTA CGACGGTGAC 
350
GGAGACGGAG GAAGATCAGG ATCGGCCGAA GAAGAGGAGA TCTGTTAGCT 
400
TTGATTCTGC TTTTGCTCCG GTGGATACTG GATTGTACAT GAGTCCTGAG 
450
AGTCCTAACG GAATCGATGT TAGTGATTCT AGCACGATTC CGTCACCGTC 
500
GTCTCCTGTT GCTCAGCTGT TTAAACCAAT GCCGATTTCC GGCGGTTTTA 
550
CGGTGGTTCC GCAGCCGTTA CCGGTTGAAA TGTCTTCGTC TTCGGAGGAT 
600
CCACCTACTT CGTTGAGTTT GTCACTACCT GGAGCTGAGA ACACGAGTTC 
650
GAGCCATAAC AATAACAACA ACGCGTTGAT GTTTCCGAGA TTTGAGAGTC 
700
AGATGAAGAT TAATGTAGAG GAGAGAGGAG AAGGACGTAG AGGTGAGTTT 
750
ATGACGGTGG TGCAGGAGAT GATAAAAGCT GAAGTGAGGA GTTACATGGC 
800
GGAAATGCAG AAAACAAGTG GTGGATTCGT CGTCGGAGGT TTATACGAAT 
850
CCGGCGGCAA TGGTGGTTTT AGGGATTGTG GAGTAATAAC ACCTAAGGTT 
900
GAGTAG
950

>AT3G50060.1 longest ORF length:301
MADRVKGPWS QEEDEQLRRM VEKYGPRNWS AISKSIPGRS GKSCRLRWCN 
50
QLSPEVEHRP FSPEEDETIV TARAQFGNKW ATIARLLNGR TDNAVKNHWN 
100
STLKRKCSGG VAVTTVTETE EDQDRPKKRR SVSFDSAFAP VDTGLYMSPE 
150
SPNGIDVSDS STIPSPSSPV AQLFKPMPIS GGFTVVPQPL PVEMSSSSED 
200
PPTSLSLSLP GAENTSSSHN NNNNALMFPR FESQMKINVE ERGEGRRGEF 
250
MTVVQEMIKA EVRSYMAEMQ KTSGGFVVGG LYESGGNGGF RDCGVITPKV 
300
E
350