fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G50260 DEAR1, CEJ1, ATERF#011 DREB AND EAR MOTIF PROTEIN 1, cooperatively regulated by ethylene and jasmonate 1 (.1)

>AT3G50260.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
SacI GAGCT|C 302


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>AT3G50260.1 length:462
ATGGACGCCG GAGTAGCAGT AAAAGCTGAC GTGGCAGTCA AAATGAAGAG 
50
AGAAAGACCA TTCAAAGGGA TCAGAATGAG AAAATGGGGG AAATGGGTTG 
100
CGGAGATTCG AGAACCCAAC AAGCGTTCAA GACTTTGGCT CGGCTCTTAC 
150
TCTACTCCCG AAGCGGCGGC GCGTGCATAC GACACGGCTG TCTTTTACCT 
200
CAGAGGACCA ACTGCTACGC TCAACTTCCC GGAGCTTCTG CCGTGTACCT 
250
CCGCCGAGGA TATGTCAGCG GCAACGATCA GGAAAAAGGC GACGGAGGTG 
300
GGAGCTCAAG TAGATGCGAT AGGGGCGACG GTGGTGCAGA ACAACAAACG 
350
CCGCCGCGTT TTTAGTCAAA AGCGTGACTT TGGCGGCGGG TTATTAGAGC 
400
TTGTTGACTT GAACAAGTTA CCTGACCCGG AAAATCTCGA TGATGATTTG 
450
GTGGGAAAAT AG
500

>AT3G50260.1 longest ORF length:153
MDAGVAVKAD VAVKMKRERP FKGIRMRKWG KWVAEIREPN KRSRLWLGSY 
50
STPEAAARAY DTAVFYLRGP TATLNFPELL PCTSAEDMSA ATIRKKATEV 
100
GAQVDAIGAT VVQNNKRRRV FSQKRDFGGG LLELVDLNKL PDPENLDDDL 
150
VGK
200