Locus |
Common name |
Short description |
AT3G50330 |
HEC2, bHLH037 |
HECATE 2, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT3G50330.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
381 |
HindIII
| A|AGCTT |
49 |
HpaI
| GTT|AAC |
559 |
PstI
| CTGCA|G |
255 |
Click here to view TAIR data
>AT3G50330.1 length:696
ATGGATAACT CCGACATTCT AATGAACATG ATGATGCAGC AGATGGAGAA | 50 |
GCTTCCTGAA CACTTCTCTA ACTCAAACCC TAACCCTAAT CCCCATAACA | 100 |
TTATGATGCT TTCTGAATCC AACACCCACC CGTTCTTCTT CAACCCCACT | 150 |
CATTCTCATC TCCCATTTGA CCAAACCATG CCTCACCACC AACCCGGTTT | 200 |
AAATTTCCGG TACGCCCCCT CCCCGTCATC ATCTCTCCCG GAGAAGAGAG | 250 |
GAGGCTGCAG CGACAACGCC AACATGGCGG CGATGAGAGA GATGATCTTT | 300 |
CGAATAGCCG TGATGCAGCC TATACATATT GATCCGGAAT CCGTAAAGCC | 350 |
ACCAAAGAGA AAGAACGTGA GGATCTCTAA GGATCCACAG AGCGTGGCAG | 400 |
CTCGGCATCG AAGGGAGAGG ATAAGCGAGC GGATTCGGAT TCTTCAGCGG | 450 |
CTTGTTCCCG GTGGGACTAA GATGGATACG GCGTCGATGC TCGATGAGGC | 500 |
TATCCATTAC GTTAAGTTTC TCAAGAAGCA AGTGCAGTCG CTGGAGGAAC | 550 |
ATGCGGTGGT TAACGGCGGA GGAATGACGG CGGTGGCCGG AGGAGCACTT | 600 |
GCGGGTACTG TTGGTGGAGG ATATGGAGGA AAAGGGTGTG GCATTATGCG | 650 |
GTCTGATCAT CACCAGATGC TTGGAAATGC ACAGATTCTT AGATGA | 700 |
>AT3G50330.1 longest ORF length:231
MDNSDILMNM MMQQMEKLPE HFSNSNPNPN PHNIMMLSES NTHPFFFNPT | 50 |
HSHLPFDQTM PHHQPGLNFR YAPSPSSSLP EKRGGCSDNA NMAAMREMIF | 100 |
RIAVMQPIHI DPESVKPPKR KNVRISKDPQ SVAARHRRER ISERIRILQR | 150 |
LVPGGTKMDT ASMLDEAIHY VKFLKKQVQS LEEHAVVNGG GMTAVAGGAL | 200 |
AGTVGGGYGG KGCGIMRSDH HQMLGNAQIL R | 250 |
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