fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G50330 HEC2, bHLH037 HECATE 2, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT3G50330.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 381
HindIII A|AGCTT 49
HpaI GTT|AAC 559
PstI CTGCA|G 255


Click here to view TAIR data

>AT3G50330.1 length:696
ATGGATAACT CCGACATTCT AATGAACATG ATGATGCAGC AGATGGAGAA 
50
GCTTCCTGAA CACTTCTCTA ACTCAAACCC TAACCCTAAT CCCCATAACA 
100
TTATGATGCT TTCTGAATCC AACACCCACC CGTTCTTCTT CAACCCCACT 
150
CATTCTCATC TCCCATTTGA CCAAACCATG CCTCACCACC AACCCGGTTT 
200
AAATTTCCGG TACGCCCCCT CCCCGTCATC ATCTCTCCCG GAGAAGAGAG 
250
GAGGCTGCAG CGACAACGCC AACATGGCGG CGATGAGAGA GATGATCTTT 
300
CGAATAGCCG TGATGCAGCC TATACATATT GATCCGGAAT CCGTAAAGCC 
350
ACCAAAGAGA AAGAACGTGA GGATCTCTAA GGATCCACAG AGCGTGGCAG 
400
CTCGGCATCG AAGGGAGAGG ATAAGCGAGC GGATTCGGAT TCTTCAGCGG 
450
CTTGTTCCCG GTGGGACTAA GATGGATACG GCGTCGATGC TCGATGAGGC 
500
TATCCATTAC GTTAAGTTTC TCAAGAAGCA AGTGCAGTCG CTGGAGGAAC 
550
ATGCGGTGGT TAACGGCGGA GGAATGACGG CGGTGGCCGG AGGAGCACTT 
600
GCGGGTACTG TTGGTGGAGG ATATGGAGGA AAAGGGTGTG GCATTATGCG 
650
GTCTGATCAT CACCAGATGC TTGGAAATGC ACAGATTCTT AGATGA
700

>AT3G50330.1 longest ORF length:231
MDNSDILMNM MMQQMEKLPE HFSNSNPNPN PHNIMMLSES NTHPFFFNPT 
50
HSHLPFDQTM PHHQPGLNFR YAPSPSSSLP EKRGGCSDNA NMAAMREMIF 
100
RIAVMQPIHI DPESVKPPKR KNVRISKDPQ SVAARHRRER ISERIRILQR 
150
LVPGGTKMDT ASMLDEAIHY VKFLKKQVQS LEEHAVVNGG GMTAVAGGAL 
200
AGTVGGGYGG KGCGIMRSDH HQMLGNAQIL R
250