fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G50410 OBP1, AtDof3. 4 OBF binding protein 1 (.1)

>AT3G50410.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 481
HindIII A|AGCTT 173


Click here to view TAIR data

>AT3G50410.1 length:762
ATGCCGACGT CTGACTCCGG TGAACCACGG CGAATAGCTA TGAAACCTAA 
50
CGGCGTAACA GTTCCGATTT CTGACCAGCA AGAACAGCTT CCATGTCCTC 
100
GTTGTGACTC ATCCAACACT AAGTTCTGTT ACTACAACAA CTACAACTTC 
150
TCTCAGCCTC GTCACTTCTG CAAAGCTTGT CGTCGTTACT GGACTCACGG 
200
TGGTACTCTC CGTGACGTTC CTGTCGGTGG TGGTACTCGT AAAAGCGCGA 
250
AACGTTCCCG CACTTGCTCG AACTCTTCTT CCTCCTCTGT TTCTGGTGTC 
300
GTCTCTAACT CTAACGGTGT TCCGTTACAA ACGACGCCTG TTCTCTTCCC 
350
TCAGTCGTCA ATCTCTAACG GCGTTACTCA CACAGTAACT GAAAGCGACG 
400
GAAAGGGAAG TGCTTTATCT CTCTGTGGAA GTTTCACCTC CACTCTGTTG 
450
AACCATAACG CTGCTGCGAC GGCTACGCAT GGATCCGGTT CGGTTATTGG 
500
TATCGGAGGT TTTGGAATCG GACTCGGGTC GGGTTTTGAT GACGTCAGCT 
550
TTGGACTCGG AAGAGCGATG TGGCCGTTTT CAACTGTTGG TACTGCGACA 
600
ACGACGAATG TTGGGAGTAA CGGTGGTCAT CACGCTGTTC CAATGCCAGC 
650
CACGTGGCAG TTCGAGGGTT TAGAGAGCAA CGCTGGTGGT GGATTTGTCT 
700
CCGGTGAGTA CTTTGCGTGG CCGGATCTTT CCATCACAAC TCCGGGAAAC 
750
TCACTCAAAT GA
800

>AT3G50410.1 longest ORF length:253
MPTSDSGEPR RIAMKPNGVT VPISDQQEQL PCPRCDSSNT KFCYYNNYNF 
50
SQPRHFCKAC RRYWTHGGTL RDVPVGGGTR KSAKRSRTCS NSSSSSVSGV 
100
VSNSNGVPLQ TTPVLFPQSS ISNGVTHTVT ESDGKGSALS LCGSFTSTLL 
150
NHNAAATATH GSGSVIGIGG FGIGLGSGFD DVSFGLGRAM WPFSTVGTAT 
200
TTNVGSNGGH HAVPMPATWQ FEGLESNAGG GFVSGEYFAW PDLSITTPGN 
250
SLK
300