fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G50510 LBD28 LOB domain-containing protein 28 (.1)

>AT3G50510.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 203
StyI C|C[AT][AT]GG 203


Click here to view TAIR data

>AT3G50510.1 length:597
ATGATGTTTC ATCAAATGGA CAAAATATCG ACACCATGCG CGGCATGCAA 
50
GCACCTGAGG AGAAAATGCA CAGAAGATTG TGTGTTTGCG CCTTACTTCC 
100
CCTCGACTAA ACTGGACAAC TACGAAGCGG TTCACAAGGT ATTTGGAGCA 
150
AGCCATGTGG CTACACTTAT CAACAGTCTT CACCCATGCC AAAGAGAATT 
200
TGCCATGGAC ACGCTCGCTT GGGAGGCACA AGTTCAAGCC AATGATCCGG 
250
TCAATGGCTG TCTGGGTATC ATTTACAACC TCCTTAGTCA GATTAAAGAC 
300
TTGGAAGAAC AACTCGCGAT CGTCAAGAAC GAACTTGCCT CTTACTGTAT 
350
CGTCCCCACA TTTGTGCCAC CACCTTCGAT GACGAATCTG GAAATGCATA 
400
ACAATCCTAT GATGATACCG GAACACACAC CTAATAACGG TGGTTGTTTA 
450
ACGGGTCAAC AGTTGTATAA CGAGGCTCAA CGTTTTGCAT CCACACAAAG 
500
CGCTCAAATG CAAGAGACGC AGATGCAGCA CGATGAGGAG AGTTACCGTG 
550
ACAAAAGTTC TTATCAAAAA TTTGGACCAT GCTTTAACCT ACATTAA
600

>AT3G50510.1 longest ORF length:198
MMFHQMDKIS TPCAACKHLR RKCTEDCVFA PYFPSTKLDN YEAVHKVFGA 
50
SHVATLINSL HPCQREFAMD TLAWEAQVQA NDPVNGCLGI IYNLLSQIKD 
100
LEEQLAIVKN ELASYCIVPT FVPPPSMTNL EMHNNPMMIP EHTPNNGGCL 
150
TGQQLYNEAQ RFASTQSAQM QETQMQHDEE SYRDKSSYQK FGPCFNLH
200