fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G50870 GATA18, HAN, MNP MONOPOLE, HANABA TANARU, GATA TRANSCRIPTION FACTOR 18, GATA type zinc finger transcription factor family protein (.1)

>AT3G50870.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions


Click here to view TAIR data

>AT3G50870.1 length:888
ATGATGCAGA CTCCGTACAC TACTTCAACG CAGGGGCAAT ATTGTCATTC 
50
TTGTGGAATG TTCCACCACC ATAGCCAAAG CTGCTGCTAC AACAACAACA 
100
ACAACTCCAA CGCCGGTTCT TACTCGATGG TCTTCTCCAT GCAAAACGGT 
150
GGCGTTTTCG AGCAGAACGG TGAGGACTAT CATCACTCTT CCTCCCTCGT 
200
TGACTGCACT CTCTCTCTTG GAACTCCTTC TACGAGGCTT TGTGAGGAAG 
250
ATGAGAAACG TAGACGCTCT ACTTCATCTG GTGCTTCTTC TTGCATCTCC 
300
AACTTTTGGG ACTTGATTCA CACCAAAAAC AACAACTCCA AAACGGCACC 
350
GTACAATAAC GTTCCTTCTT TCTCCGCTAA CAAGCCAAGT CGCGGTTGTT 
400
CCGGTGGTGG TGGTGGCGGA GGAGGCGGTG GCGGAGGTGA CTCTCTTCTC 
450
GCTAGACGCT GTGCCAACTG TGACACTACT TCTACTCCAC TATGGAGGAA 
500
TGGTCCTAGA GGCCCTAAGT CCCTATGCAA CGCATGCGGC ATTCGTTTCA 
550
AGAAGGAAGA GAGAAGAACT ACTGCGGCTA CAGGAAACAC CGTCGTCGGA 
600
GCTGCACCGG TTCAAACCGA CCAGTACGGG CATCACAACT CTGGCTACAA 
650
TAATTACCAT GCTGCCACTA ATAACAACAA TAATAATGGT ACTCCGTGGG 
700
CTCATCACCA CTCGACGCAG AGGGTTCCGT GTAATTATCC GGCAAATGAG 
750
ATCAGGTTCA TGGATGATTA CGGCAGTGGA GTAGCAAACA ACGTTGAATC 
800
CGACGGTGCT CACGGCGGTG TTCCGTTCCT TTCTTGGAGG CTTAATGTAG 
850
CGGATAGGGC AAGTCTTGTC CATGACTTTA CCAGATGA
900

>AT3G50870.1 longest ORF length:295
MMQTPYTTST QGQYCHSCGM FHHHSQSCCY NNNNNSNAGS YSMVFSMQNG 
50
GVFEQNGEDY HHSSSLVDCT LSLGTPSTRL CEEDEKRRRS TSSGASSCIS 
100
NFWDLIHTKN NNSKTAPYNN VPSFSANKPS RGCSGGGGGG GGGGGGDSLL 
150
ARRCANCDTT STPLWRNGPR GPKSLCNACG IRFKKEERRT TAATGNTVVG 
200
AAPVQTDQYG HHNSGYNNYH AATNNNNNNG TPWAHHHSTQ RVPCNYPANE 
250
IRFMDDYGSG VANNVESDGA HGGVPFLSWR LNVADRASLV HDFTR
300