Locus |
Common name |
Short description |
AT3G51910 |
AT-HSFA7A |
ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A, heat shock transcription factor A7A (.1) |
>AT3G51910.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaJI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, MwoI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AluI
| AG|CT |
402, 473, 484, 612 |
ApoI
| Pu|AATTPy |
295 |
BfaI
| C|TAG |
546 |
BslI
| CCNNNNN|NNGG |
57 |
BsrDI
| GCAATGNN| |
555 |
BsrI
| ACTGGN| |
741 |
BssKI
| |CCNGG |
17 |
BstF5I
| GGATGNN| |
115, 763 |
Cac8I
| GCN|NGC |
394 |
DdeI
| C|TNAG |
447, 786 |
DpnI
| GA-CH3|TC |
29, 116, 731 |
DpnII
| |GATC |
29, 116, 731 |
Fnu4HI
| GC|NGC |
25, 455 |
HinfI
| G|ANTC |
197, 443, 560, 627 |
HpaII
| C|CGG |
17 |
Hpy188I
| TCN|GA |
89, 244, 268, 663 |
HpyCH4III
| ACN|GT |
329 |
HpyCH4V
| TG|CA |
180, 298, 395, 555, 573, 690 |
MboI
| |GATC |
29, 116, 731 |
MseI
| T|TAA |
606 |
MslI
| CAPyNN|NNPuTG |
71 |
MspI
| C|CGG |
17 |
N.BstNBI
| GAGTCNNNN|N |
448, 565, 632 |
NciI
| CC|[CG]GG |
17 |
NlaIII
| CATG| |
386, 698 |
Sau3AI
| |GATC |
29, 116, 731 |
ScrFI
| CC|NGG |
17 |
SmlI
| C|TPyPuAG |
234, 616 |
Taqƒ¿I
| T|CGA |
656 |
TfiI
| G|A[AT]TC |
197 |
TseI
| G|C[AT]GC |
25, 455 |
Tsp509I
| |AATT |
227, 294, 604, 666 |
TspRI
| NNCA[CG]TGNN| |
127 |
Click here to view TAIR data
>AT3G51910.1 length:819
ATGATGAACC CGTTTCTCCC GGAAGGCTGC GATCCACCAC CACCACCACA | 50 |
ACCAATGGAG GGTTTACACG AAAATGCTCC ACCTCCATTT CTGACCAAGA | 100 |
CATTTGAGAT GGTGGATGAT CCAAACACTG ACCACATCGT ATCTTGGAAC | 150 |
AGAGGAGGAA CAAGTTTTGT CGTCTGGGAT TTGCATTCTT TCTCCACGAT | 200 |
TCTCCTTCCT CGTCATTTCA AACACAGCAA TTTCTCAAGT TTCATCAGAC | 250 |
AACTCAATAC TTATGGTTTC AGAAAGATAG AAGCAGAGAG ATGGGAATTT | 300 |
GCAAACGAAG AGTTTTTGTT AGGACAAAGA CAGTTGTTGA AGAACATCAA | 350 |
GAGGAGAAAC CCTTTTACTC CATCATCTTC ACCAAGCCAT GACGCTTGCA | 400 |
ACGAGCTTCG CAGAGAGAAG CAAGTGCTAA TGATGGAGAT AGTGAGTCTA | 450 |
AGACAGCAGC AACAAACAAC GAAAAGCTAC ATCAAAGCTA TGGAACAGAG | 500 |
GATAGAAGGA ACAGAGAGGA AACAGAGACA AATGATGTCG TTTCTGGCTA | 550 |
GAGCAATGCA GAGTCCTTCG TTTTTGCATC AGTTGTTGAA ACAAAGAGAT | 600 |
AAAAAAATTA AGGAGCTTGA GGATAATGAG TCAGCAAAGA GGAAAAGAGG | 650 |
TTCTTCTTCG ATGTCGGAAT TGGAAGTTTT GGCTTTGGAG ATGCAAGGGC | 700 |
ATGGAAAACA GAGGAATATG TTGGAAGAAG AGGATCATCA ACTGGTGGTA | 750 |
GAGAGAGAGT TGGATGATGG TTTCTGGGAA GAGTTGCTTA GTGATGAGAG | 800 |
TTTGGCTTCC ACCTCCTAA | 850 |
>AT3G51910.1 longest ORF length:272
MMNPFLPEGC DPPPPPQPME GLHENAPPPF LTKTFEMVDD PNTDHIVSWN | 50 |
RGGTSFVVWD LHSFSTILLP RHFKHSNFSS FIRQLNTYGF RKIEAERWEF | 100 |
ANEEFLLGQR QLLKNIKRRN PFTPSSSPSH DACNELRREK QVLMMEIVSL | 150 |
RQQQQTTKSY IKAMEQRIEG TERKQRQMMS FLARAMQSPS FLHQLLKQRD | 200 |
KKIKELEDNE SAKRKRGSSS MSELEVLALE MQGHGKQRNM LEEEDHQLVV | 250 |
ERELDDGFWE ELLSDESLAS TS | 300 |
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