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| Locus | Common name | Short description |
| AT3G52440 | AtDof3,5 | Dof-type zinc finger DNA-binding family protein (.1) |
>AT3G52440.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AvaI, AvrII, BaeI, BalI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrI, BssHII, BssSI, BstBI, BstEII, BstF5I, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, DraI, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HphI, Hpy99I, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, N.BstNBI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, SwaI, TliI, Tth111I, XbaI, XhoI, XmaI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 616 |
| AccII(FnuDII) | CG|CG | 58 |
| AciI | C|CGC | 163, 193, 229, 276 |
| AgeI | A|CCGGT | 654 |
| AluI | AG|CT | 552 |
| AseI | AT|TAAT | 487 |
| AvaII | G|G[AT]CC | 175, 437 |
| BamHI | G|GATCC | 91 |
| BanII | GPuGCPy|C | 714 |
| BclI | T|GATCA | 477 |
| BfaI | C|TAG | 267 |
| BsaBI | GATNN|NNATC | 90, 470 |
| BsaJI | C|CNNGG | 294, 434 |
| BsaWI | [AT]|CCGG[AT] | 492, 633, 654 |
| BslI | CCNNNNN|NNGG | 87, 210, 300, 543 |
| Bsp1286I | G[GAT]GC[CAT]|C | 714 |
| BspDI | AT|CGAT | 316 |
| BspHI | T|CATGA | 474 |
| BsrDI | GCAATGNN| | 199 |
| BsrFI | Pu|CCGGPy | 424, 654 |
| BsrGI | T|GTACA | 645 |
| BssKI | |CCNGG | 294, 543 |
| BstAPI | GCANNNN|NTGC | 160 |
| BstNI | CC|[AT]GG | 543 |
| BstUI | CG|CG | 58 |
| BstYI | Pu|GATCPy | 91 |
| BtgI | C|CPuPyGG | 434 |
| Cac8I | GCN|NGC | 530 |
| Cfr10I | [AG]|CCGG[TC] | 424, 654 |
| ClaI | AT|CGAT | 316 |
| DdeI | C|TNAG | 136, 389 |
| DpnI | GA-CH3|TC | 64, 90, 317, 476 |
| DpnII | |GATC | 64, 90, 317, 476 |
| DraIII | CACNNN|GTG | 505 |
| EaeI | Py|GGCCPu | 40 |
| Fnu4HI | GC|NGC | 38, 160, 232 |
| HaeIII | GG|CC | 13, 39 |
| HinfI | G|ANTC | 347, 363, 629, 675, 684 |
| HpaII | C|CGG | 294, 423, 491, 632, 653 |
| Hpy188I | TCN|GA | 585 |
| HpyCH4IV | A|CGT | 618 |
| HpyCH4V | TG|CA | 152 |
| MboI | |GATC | 64, 90, 317, 476 |
| MseI | T|TAA | 486 |
| MslI | CAPyNN|NNPuTG | 433, 611 |
| MspI | C|CGG | 294, 423, 491, 632, 653 |
| MwoI | GCNNNNN|NNGC | 151 |
| NciI | CC|[CG]GG | 294 |
| NcoI | C|CATGG | 434 |
| NlaIII | CATG| | 433, 444, 473, 611 |
| NlaIV | GGN|NCC | 91, 187, 438, 713 |
| PflMI | CCANNNN|NTGG | 87, 543 |
| PsiI | TTA|TAA | 522 |
| PspGI | |CC[AT]GG | 543 |
| RsaI | GT|AC | 644 |
| Sau3AI | |GATC | 64, 90, 317, 476 |
| Sau96I | G|GNCC | 175, 437 |
| ScrFI | CC|NGG | 294, 543 |
| SfcI | C|TPuPyAG | 126, 206 |
| StuI | AGG|CCT | 14 |
| StyI | C|C[AT][AT]GG | 434 |
| Taqƒ¿I | T|CGA | 220, 315 |
| TfiI | G|A[AT]TC | 347, 363, 675, 684 |
| TseI | G|C[AT]GC | 160 |
| Tsp45I | |GT[CG]AC | 627 |
| Tsp509I | |AATT | 281, 338, 380 |
| TspRI | NNCA[CG]TGNN| | 730 |
| XcmI | CCANNNNN|NNNNTGG | 621 |
| XmnI | GAANN|NNTTC | 554 |
Click here to view TAIR data
>AT3G52440.1 length:744
ATGGAGAGAG CAGAGGCCTT GACATCATCG TTTATATGGC GGCCAAACGC | 50 |
AAACGCAAAC GCGGAGATCA CGCCGAGTTG TCCAAGATGT GGATCCTCTA | 100 |
ACACAAAGTT CTGTTACTAC AACAACTATA GCCTCACTCA GCCTCGCTAC | 150 |
TTCTGCAAAG GCTGCCGCAG ATATTGGACC AAAGGTGGTT CCCTCCGCAA | 200 |
TGTTCCTGTA GGCGGTGGCT GTCGAAAATC CCGCCGCCCC AAATCATCTT | 250 |
CTGGTAACAA TACTAAAACT AGCCTAACCG CTAATTCTGG CAACCCCGGT | 300 |
GGTGGTTCAC CAAGCATCGA TCTTGCTCTT GTTTACGCCA ATTTCTTGAA | 350 |
TCCAAAGCCT GACGAATCTA TACTACAAGA AAATTGCGAC TTAGCCACTA | 400 |
CGGATTTTTT GGTAGATAAT CCTACCGGCA CTTCCATGGA CCCTTCATGG | 450 |
AGTATGGACA TCAATGATGG TCATCATGAT CATTATATTA ATCCGGTGGA | 500 |
ACACATTGTG GAGGAATGTG GTTATAATGG CTTGCCTCCA TTTCCTGGTG | 550 |
AAGAGCTTCT CTCTTTAGAC ACTAATGGTG TTTGGTCTGA TGCTTTGTTG | 600 |
ATTGGTCATA ACCATGTAGA CGTTGGCGTG ACTCCGGTTC AGGCTGTACA | 650 |
CGAACCGGTG GTTCATTTCG CTGACGAATC CAATGATTCC ACCAATCTCT | 700 |
TGTTTGGAAG TTGGAGCCCT TTTGATTTCA CTGCCGATGG ATGA | 750 |
>AT3G52440.1 longest ORF length:247
MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY | 50 |
FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG | 100 |
GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW | 150 |
SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL | 200 |
IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG | 250 |