Locus |
Common name |
Short description |
AT3G52440 |
AtDof3,5 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT3G52440.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
91 |
NcoI
| C|CATGG |
434 |
StyI
| C|C[AT][AT]GG |
434 |
Click here to view TAIR data
>AT3G52440.1 length:744
ATGGAGAGAG CAGAGGCCTT GACATCATCG TTTATATGGC GGCCAAACGC | 50 |
AAACGCAAAC GCGGAGATCA CGCCGAGTTG TCCAAGATGT GGATCCTCTA | 100 |
ACACAAAGTT CTGTTACTAC AACAACTATA GCCTCACTCA GCCTCGCTAC | 150 |
TTCTGCAAAG GCTGCCGCAG ATATTGGACC AAAGGTGGTT CCCTCCGCAA | 200 |
TGTTCCTGTA GGCGGTGGCT GTCGAAAATC CCGCCGCCCC AAATCATCTT | 250 |
CTGGTAACAA TACTAAAACT AGCCTAACCG CTAATTCTGG CAACCCCGGT | 300 |
GGTGGTTCAC CAAGCATCGA TCTTGCTCTT GTTTACGCCA ATTTCTTGAA | 350 |
TCCAAAGCCT GACGAATCTA TACTACAAGA AAATTGCGAC TTAGCCACTA | 400 |
CGGATTTTTT GGTAGATAAT CCTACCGGCA CTTCCATGGA CCCTTCATGG | 450 |
AGTATGGACA TCAATGATGG TCATCATGAT CATTATATTA ATCCGGTGGA | 500 |
ACACATTGTG GAGGAATGTG GTTATAATGG CTTGCCTCCA TTTCCTGGTG | 550 |
AAGAGCTTCT CTCTTTAGAC ACTAATGGTG TTTGGTCTGA TGCTTTGTTG | 600 |
ATTGGTCATA ACCATGTAGA CGTTGGCGTG ACTCCGGTTC AGGCTGTACA | 650 |
CGAACCGGTG GTTCATTTCG CTGACGAATC CAATGATTCC ACCAATCTCT | 700 |
TGTTTGGAAG TTGGAGCCCT TTTGATTTCA CTGCCGATGG ATGA | 750 |
>AT3G52440.1 longest ORF length:247
MERAEALTSS FIWRPNANAN AEITPSCPRC GSSNTKFCYY NNYSLTQPRY | 50 |
FCKGCRRYWT KGGSLRNVPV GGGCRKSRRP KSSSGNNTKT SLTANSGNPG | 100 |
GGSPSIDLAL VYANFLNPKP DESILQENCD LATTDFLVDN PTGTSMDPSW | 150 |
SMDINDGHHD HYINPVEHIV EECGYNGLPP FPGEELLSLD TNGVWSDALL | 200 |
IGHNHVDVGV TPVQAVHEPV VHFADESNDS TNLLFGSWSP FDFTADG | 250 |
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