fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G52525 ATOFP6, OFP6 ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 6, ovate family protein 6 (.1)

>AT3G52525.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
PvuII CAG|CTG 54
SalI G|TCGAC 46


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>AT3G52525.1 length:480
ATGGCGACTA AAAGCAAGAA GAAGATCCTG AAGACTGTAT CTGTTGTCGA 
50
CATCAGCTGC GGCAACTGTA TAAAACCAAC TTTCGCCTCT ATTTTCAACT 
100
TTTTCTCCAA AAAGCCTAAA CGTCCCTCGT CTACTTACCG TCACTGCCAC 
150
TCCTCCATCT CCTCCGCCAC ACCCTCCTCC ACGCCTTTGG CCACCGCATC 
200
CGTCGCCGTG GAGAAAGATT CTGACGATCC GTACCTAGAT TTCCGGCAGT 
250
CTATGCTTCA AATGATACTA GAGAACCAGA TTTACTCGAA AGATGAACTT 
300
AGAGAGCTTC TTCAATGTTT CCTCAGCCTC AATTCTCACT ATCATCACGG 
350
CATCATCGTC CGTGCCTTCT CGGAAATATG GGAAGACGTT TCCTCCGCCG 
400
CTGCTTCCGC CGTCGAAGCG TCCCCTCTCA TCACCCGTCA TGTGTCACGT 
450
GCGTCACGTG ATTACTATAA CTATTACTAG 
500

>AT3G52525.1 longest ORF length:159
MATKSKKKIL KTVSVVDISC GNCIKPTFAS IFNFFSKKPK RPSSTYRHCH 
50
SSISSATPSS TPLATASVAV EKDSDDPYLD FRQSMLQMIL ENQIYSKDEL 
100
RELLQCFLSL NSHYHHGIIV RAFSEIWEDV SSAAASAVEA SPLITRHVSR 
150
ASRDYYNYY
200