|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G52540 | ATOFP18, OFP18 | ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 18, ovate family protein 18 (.1) |
>AT3G52540.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 708 |
| HindIII | A|AGCTT | 137, 195 |
| HpaI | GTT|AAC | 151 |
| NcoI | C|CATGG | 91 |
| SalI | G|TCGAC | 714 |
| StyI | C|C[AT][AT]GG | 91, 419 |
Click here to view TAIR data
>AT3G52540.1 length:849
ATGGTAAGGA AAATGAAACT CCCATTTCTA AACAAGAACA CATCATCTTC | 50 |
ATCATTTTCT TCAAATTCAT CATCTTCTTC CTCTTCGTGG CCATGGCCTT | 100 |
CCTCTCATCA ACAAAACCTT AAAACAATAT CTTCCAAAGC TTCCTTCATC | 150 |
GTTAACAAAC CTAAAGATGT CTACGAACCC GAGCCACCAC CGAGAAGCTT | 200 |
CTCCTCCTCC CCCTCCTCCT CCTCCTACTC TTCCTTCTCC TCTACAAGCC | 250 |
ATGCTATAGA AAATCCACCA GAGATAGAGT CTATAGAGAA TGTGATTAAA | 300 |
GGACTAAAAT CATCGAAGAG ACTCATCTTT GAACGGAGAG GAACATCGAA | 350 |
CTCTATACTC GAAGAAGCTA CCAAGAGAGA CGATCATGAA GAAGAAGAGG | 400 |
ACGGTTTAAT GCTCTTGTCC TTGGAGTCAA ACGATCCTTA CACTGATTTC | 450 |
AAGAACTCAA TGGAAAAGAT GGTTGAAGTA CACGTGCTTC ATCATGACTG | 500 |
GATAAGCCTG GAGAAACTTC TCTTTTGGTT CTTGAAAGTC AACGTCAAGG | 550 |
CAAGCCATAG ATACATCTTC GCCGCCTTTG TCGATTTGGT CTTAAACTTA | 600 |
GCAGTAGGGC CTTCTAAAGA TGTTGCTGGA GAACCTAATT CCGACGTCGT | 650 |
CGTGGAGGAT TCTCTTTCAT CTTCGTGGCC GGTCTCGTTG TACTCGTCCT | 700 |
CCGATGAGAA TTCGTCGACG TCCGTACGAT TCTTGCCGGA GACTTCGATA | 750 |
GGCGAGAAGG GTAGAGACGT TTGTTGTTTA TCGTCGTTGT TTGAGTTAGA | 800 |
AGAAAAGATT AAAGACAATA TTGATCCAAA TGATTATGTA TCTTCTTAA | 850 |
>AT3G52540.1 longest ORF length:282
MVRKMKLPFL NKNTSSSSFS SNSSSSSSSW PWPSSHQQNL KTISSKASFI | 50 |
VNKPKDVYEP EPPPRSFSSS PSSSSYSSFS STSHAIENPP EIESIENVIK | 100 |
GLKSSKRLIF ERRGTSNSIL EEATKRDDHE EEEDGLMLLS LESNDPYTDF | 150 |
KNSMEKMVEV HVLHHDWISL EKLLFWFLKV NVKASHRYIF AAFVDLVLNL | 200 |
AVGPSKDVAG EPNSDVVVED SLSSSWPVSL YSSSDENSST SVRFLPETSI | 250 |
GEKGRDVCCL SSLFELEEKI KDNIDPNDYV SS | 300 |