Locus |
Common name |
Short description |
AT3G53200 |
ATMYB27 |
myb domain protein 27 (.1) |
>AT3G53200.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
567 |
HindIII
| A|AGCTT |
519 |
NcoI
| C|CATGG |
37 |
PstI
| CTGCA|G |
630 |
StyI
| C|C[AT][AT]GG |
37 |
Click here to view TAIR data
>AT3G53200.1 length:717
ATGGATTTTA AGAAGGAAGA AACACTTCGT AGAGGGCCAT GGCTCGAAGA | 50 |
AGAAGACGAA CGGCTAGTGA AGGTCATTAG TCTTTTGGGA GAACGTCGTT | 100 |
GGGATTCTTT AGCAATAGTT TCCGGTTTGA AGAGGAGTGG TAAGAGTTGC | 150 |
AGGCTAAGGT GGATGAACTA TCTGAATCCG ACTCTGAAGC GTGGACCGAT | 200 |
GAGTCAAGAA GAAGAGAGAA TCATCTTTCA GCTCCATGCT CTATGGGGTA | 250 |
ACAAGTGGTC GAAGATTGCG AGAAGATTAC CCGGTAGGAC TGATAACGAG | 300 |
ATAAAGAACT ATTGGAGAAC TCATTATAGA AAGAAACAGG AAGCTCAAAA | 350 |
CTATGGAAAG CTCTTTGAGT GGAGAGGAAA TACAGGAGAA GAATTGTTGC | 400 |
ACAAGTATAA GGAAACAGAG ATCACTAGGA CAAAGACGAC GTCTCAAGAA | 450 |
CATGGTTTTG TTGAAGTTGT GAGCATGGAA AGTGGTAAAG AAGCCAACGG | 500 |
TGGTGTTGGT GGAAGAGAAA GCTTCGGTGT TATGAAATCA CCGTATGAAA | 550 |
ATCGGATTTC GGATTGGATA TCAGAGATTT CTACTGACCA GAGTGAAGCA | 600 |
AATCTTTCAG AAGATCACAG CAGCAATAGC TGCAGTGAGA ACAATATTAA | 650 |
CATTGGTACT TGGTGGTTTC AAGAGACTAG GGACTTTGAG GAGTTTTCAT | 700 |
GTTCTCTATG GTCATAA | 750 |
>AT3G53200.1 longest ORF length:238
MDFKKEETLR RGPWLEEEDE RLVKVISLLG ERRWDSLAIV SGLKRSGKSC | 50 |
RLRWMNYLNP TLKRGPMSQE EERIIFQLHA LWGNKWSKIA RRLPGRTDNE | 100 |
IKNYWRTHYR KKQEAQNYGK LFEWRGNTGE ELLHKYKETE ITRTKTTSQE | 150 |
HGFVEVVSME SGKEANGGVG GRESFGVMKS PYENRISDWI SEISTDQSEA | 200 |
NLSEDHSSNS CSENNINIGT WWFQETRDFE EFSCSLWS | 250 |
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