fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G53310 REM20 AP2/B3-like transcriptional factor family protein (.1)

>AT3G53310.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 551
PstI CTGCA|G 521
StyI C|C[AT][AT]GG 132


Click here to view TAIR data

>AT3G53310.1 length:861
ATGGCTGACG ATAGCGAATT GTATCCTCGT TTCTTCAAAG TGTTCCTCGT 
50
TGAATCGGCT TCTGAATCGT TGATGATTCC GTTGCCTTTT ATGGCATTTC 
100
TTGCTGATCC ATTGCCAAAG ACAGTGAAGC TCCAAGGTCT TGGAGGAAAA 
150
CTTTGGACTG TGAGCTTGAA GAAAATAAGC GGAGCTGCGT ATCTTACTAG 
200
AGGATGGCCA AAATTCGCAG AGGAACATGA GCTGAAGAAC GGAGAGTTCA 
250
TGACATTTGT GTATGATGGT CATCGTACCT TTGAAGTGAG TGTCTTTGAT 
300
CGTTGGGGTA GCAAAGAGGT CAGAGCTGAA ATACAAGCCA TACCACTTTC 
350
TGATTCTGAT TCTGATTCTG TTGTGGAAGA CGAAAAAGAC TCAACTGATG 
400
TTGTTGAAGA TGATGATGAT GAAGATGAAG ATGAAGATGA AGATGATGAT 
450
GGTAGCTTTG ATGAAGATGA AGAAATCAGC CAGAGTCTTT ATCCGATTGA 
500
CGAAGAGACT GCAACCGATG CTGCAGTTTT TGAAGGGAAC TTGGACGTGG 
550
AAGCTTTAAC TAATCCACAC TTTCCGACTA CGCTCAAGAA CAGGATTTAT 
600
GAACTGTTGA TCCCAGCCAA TGTGGTGAAG GATAATAACC TTGAATTTGG 
650
TTCATCCATC AAGTACATCG ATGGAGAAGG AACCTTAGTA GGGCTAAGAG 
700
GAAAATGGGC TGATAAGAGG GTTTGCTTCA AAGGATGGGA CAGGATTTGC 
750
AGAAGGAACA GGCTCAAAAA GCACCAAGAT ACTGTCGAAT GCGAGCTTCT 
800
TCATGATGAC CAGAAGATGG TTCATTCCAT CCGAGTCCAT GTCTTGCGTA 
850
GAGATGCTTG A
900

>AT3G53310.1 longest ORF length:286
MADDSELYPR FFKVFLVESA SESLMIPLPF MAFLADPLPK TVKLQGLGGK 
50
LWTVSLKKIS GAAYLTRGWP KFAEEHELKN GEFMTFVYDG HRTFEVSVFD 
100
RWGSKEVRAE IQAIPLSDSD SDSVVEDEKD STDVVEDDDD EDEDEDEDDD 
150
GSFDEDEEIS QSLYPIDEET ATDAAVFEGN LDVEALTNPH FPTTLKNRIY 
200
ELLIPANVVK DNNLEFGSSI KYIDGEGTLV GLRGKWADKR VCFKGWDRIC 
250
RRNRLKKHQD TVECELLHDD QKMVHSIRVH VLRRDA
300