fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G53340 NF-YB10 "nuclear factor Y, subunit B10", nuclear factor Y, subunit B10 (.1)

>AT3G53340.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 199


Click here to view TAIR data

>AT3G53340.1 length:531
ATGGCCGAAT CGCAAACCGG TGGTGGTGGT GGTGGAAGCC ATGAGAGTGG 
50
CGGTGATCAG AGCCCGAGGT CTTTGAATGT TCGTGAGCAG GACAGGTTTC 
100
TTCCGATTGC TAACATAAGC CGTATCATGA AGAGAGGTTT ACCTCTAAAT 
150
GGCAAAATCG CTAAAGATGC TAAAGAGACT ATGCAGGAAT GTGTCTCTGA 
200
ATTCATCAGC TTCGTCACCA GCGAGGCTAG TGATAAGTGC CAAAGAGAGA 
250
AAAGGAAGAC CATCAATGGA GATGATTTGC TTTGGGCTAT GGCCACTTTA 
300
GGATTCGAAG ATTACATCGA TCCCCTCAAG GTTTACCTGA TGCGATATAG 
350
AGAGATGGAG GGTGACACTA AAGGATCAGG AAAAGGCGGG GAATCGAGTG 
400
CAAAGAGAGA TGGTCAACCA AGCCAAGTGT CTCAGTTCTC GCAGGTTCCT 
450
CAACAAGGCT CATTCTCACA GGGTCCTTAT GGAAACTCTC AAGGTTCGAA 
500
TATGATGGTT CAAATGCCGG GCACAGAGTA G
550

>AT3G53340.1 longest ORF length:176
MAESQTGGGG GGSHESGGDQ SPRSLNVREQ DRFLPIANIS RIMKRGLPLN 
50
GKIAKDAKET MQECVSEFIS FVTSEASDKC QREKRKTING DDLLWAMATL 
100
GFEDYIDPLK VYLMRYREME GDTKGSGKGG ESSAKRDGQP SQVSQFSQVP 
150
QQGSFSQGPY GNSQGSNMMV QMPGTE
200