Locus |
Common name |
Short description |
AT3G53820 |
|
C2H2 and C2HC zinc fingers superfamily protein (.1) |
>AT3G53820.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
369 |
HindIII
| A|AGCTT |
101 |
NdeI
| CA|TATG |
63 |
SacI
| GAGCT|C |
376 |
Click here to view TAIR data
>AT3G53820.1 length:429
ATGAATAGAA AATACTTGGA TCGTCGATCA TATTCATGGT CCGGATCACA | 50 |
AGCAAGACCA TACATATGCG AATTTTGCGA GAGAGGTTTT TCCAACGCAC | 100 |
AAGCTTTAGG AGGGCACATG AACATCCACA GAAAAGACAG GGCAAAACTT | 150 |
CGACAAGCGA ACCTAAAAGA AGAAGACAGT GAAGATGCCA TTTGCACCAC | 200 |
TTCGAGAAAT CGGTTTGGGC AAGAGCTTAT TGAGTTACCT TTCTTCGTTG | 250 |
ATACGGTCGG TCCAAGAAGA AAAGGAGAAG ATGATAAAAG CGAAAAAGGT | 300 |
TTAGGAGATG AAGAAAAGAA AAATATGAGG ATACTTCAAA AGGCTTTATC | 350 |
TCAAAGTGCA GACGTGATAG ATCTTGAGCT CCGTCTAGGA TTAGATCCTT | 400 |
ATAAAAAAAC AACAAGTACA AGTACGTAA | 450 |
>AT3G53820.1 longest ORF length:142
MNRKYLDRRS YSWSGSQARP YICEFCERGF SNAQALGGHM NIHRKDRAKL | 50 |
RQANLKEEDS EDAICTTSRN RFGQELIELP FFVDTVGPRR KGEDDKSEKG | 100 |
LGDEEKKNMR ILQKALSQSA DVIDLELRLG LDPYKKTTST ST | 150 |
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