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| Locus | Common name | Short description |
| AT3G54220 | SGR1, SCR | SHOOT GRAVITROPISM 1, SCARECROW, GRAS family transcription factor (.1) |
>AT3G54220.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 626, 944, 1917 |
| HindIII | A|AGCTT | 931, 1366, 1903 |
| NcoI | C|CATGG | 1316 |
| StyI | C|C[AT][AT]GG | 1316 |
| XbaI | T|CTAGA | 1267 |
Click here to view TAIR data
>AT3G54220.1 length:1962
ATGGCGGAAT CCGGCGATTT CAACGGTGGT CAACCTCCTC CTCATAGTCC | 50 |
TCTGAGAACA ACTTCTTCCG GTAGTAGCAG CAGCAACAAC CGTGGTCCTC | 100 |
CTCCTCCTCC TCCTCCTCCT TTAGTGATGG TGAGAAAAAG ATTAGCTTCC | 150 |
GAGATGTCTT CTAACCCTGA CTACAACAAC TCCTCTCGTC CTCCTCGCCG | 200 |
TGTCTCTCAC CTTCTTGACT CCAACTACAA TACTGTCACA CCACAACAAC | 250 |
CACCGTCTCT TACGGCGGCG GCTACTGTAT CTTCTCAACC AAACCCACCA | 300 |
CTCTCTGTTT GTGGCTTCTC TGGTCTTCCC GTTTTTCCTT CAGACCGTGG | 350 |
TGGTCGGAAT GTTATGATGT CCGTACAACC AATGGATCAA GACTCTTCAT | 400 |
CTTCTTCTGC TTCACCTACT GTATGGGTTG ACGCCATTAT CAGAGACCTT | 450 |
ATCCATTCCT CAACTTCAGT CTCTATTCCT CAACTTATCC AAAACGTTAG | 500 |
AGACATTATC TTCCCTTGTA ACCCAAATCT CGGTGCTCTT CTTGAATACA | 550 |
GGCTCCGATC TCTCATGCTC CTTGATCCTT CCTCTTCCTC TGACCCTTCT | 600 |
CCTCAAACTT TCGAACCTCT CTATCAGATC TCCAACAATC CTTCTCCTCC | 650 |
ACAACAGCAA CAGCAGCACC AACAACAACA ACAACAGCAT AAGCCTCCTC | 700 |
CTCCTCCGAT TCAGCAGCAA GAAAGAGAAA ATTCTTCTAC CGATGCACCA | 750 |
CCGCAACCAG AGACAGTGAC GGCCACTGTT CCCGCCGTCC AAACAAATAC | 800 |
GGCGGAGGCT TTAAGAGAGA GGAAGGAAGA GATTAAGAGG CAGAAGCAAG | 850 |
ACGAAGAAGG ATTACACCTT CTCACATTGC TGCTACAGTG TGCTGAAGCT | 900 |
GTCTCTGCTG ATAATCTCGA AGAAGCAAAC AAGCTTCTTC TTGAGATCTC | 950 |
TCAGTTATCA ACTCCTTACG GGACCTCAGC GCAGAGAGTA GCTGCTTACT | 1000 |
TCTCGGAAGC TATGTCAGCG AGATTACTCA ACTCGTGTCT CGGAATTTAC | 1050 |
GCGGCTTTGC CTTCACGGTG GATGCCTCAA ACGCATAGCT TGAAAATGGT | 1100 |
CTCTGCGTTT CAGGTCTTTA ATGGGATAAG CCCTTTAGTG AAATTCTCAC | 1150 |
ACTTTACAGC GAATCAGGCG ATTCAAGAAG CATTTGAGAA AGAAGACAGT | 1200 |
GTACACATCA TTGACTTGGA CATCATGCAG GGACTTCAAT GGCCTGGTTT | 1250 |
ATTCCACATT CTTGCTTCTA GACCTGGAGG ACCTCCACAC GTGCGACTCA | 1300 |
CGGGACTTGG TACTTCCATG GAAGCTCTTC AGGCTACAGG GAAACGTCTT | 1350 |
TCGGATTTCG CAGATAAGCT TGGCCTGCCT TTTGAGTTCT GCCCTTTAGC | 1400 |
TGAGAAAGTT GGAAACTTGG ACACTGAGAG ACTCAATGTG AGGAAAAGGG | 1450 |
AAGCTGTGGC TGTTCACTGG CTTCAACATT CTCTTTATGA TGTCACTGGC | 1500 |
TCTGATGCAC ACACTCTCTG GTTACTCCAA AGATTAGCTC CTAAAGTTGT | 1550 |
GACAGTAGTG GAACAAGATT TGAGCCACGC TGGTTCTTTC TTAGGAAGAT | 1600 |
TTGTAGAAGC AATACATTAC TACTCTGCAC TCTTTGACTC ACTGGGAGCA | 1650 |
AGCTACGGCG AAGAGAGTGA AGAGAGACAT GTCGTGGAAC AGCAGCTATT | 1700 |
ATCGAAAGAG ATACGGAATG TATTAGCGGT TGGAGGACCA TCGAGAAGCG | 1750 |
GTGAAGTGAA GTTTGAGAGC TGGAGGGAGA AAATGCAACA ATGTGGGTTT | 1800 |
AAAGGTATAT CTTTAGCTGG AAATGCAGCT ACACAAGCGA CTCTACTGTT | 1850 |
GGGAATGTTT CCTTCGGATG GTTACACTTT GGTTGATGAT AATGGTACAC | 1900 |
TTAAGCTTGG ATGGAAAGAT CTTTCGTTAC TCACTGCTTC AGCTTGGACG | 1950 |
CCTCGTTCTT AG | 2000 |
>AT3G54220.1 longest ORF length:653
MAESGDFNGG QPPPHSPLRT TSSGSSSSNN RGPPPPPPPP LVMVRKRLAS | 50 |
EMSSNPDYNN SSRPPRRVSH LLDSNYNTVT PQQPPSLTAA ATVSSQPNPP | 100 |
LSVCGFSGLP VFPSDRGGRN VMMSVQPMDQ DSSSSSASPT VWVDAIIRDL | 150 |
IHSSTSVSIP QLIQNVRDII FPCNPNLGAL LEYRLRSLML LDPSSSSDPS | 200 |
PQTFEPLYQI SNNPSPPQQQ QQHQQQQQQH KPPPPPIQQQ ERENSSTDAP | 250 |
PQPETVTATV PAVQTNTAEA LRERKEEIKR QKQDEEGLHL LTLLLQCAEA | 300 |
VSADNLEEAN KLLLEISQLS TPYGTSAQRV AAYFSEAMSA RLLNSCLGIY | 350 |
AALPSRWMPQ THSLKMVSAF QVFNGISPLV KFSHFTANQA IQEAFEKEDS | 400 |
VHIIDLDIMQ GLQWPGLFHI LASRPGGPPH VRLTGLGTSM EALQATGKRL | 450 |
SDFADKLGLP FEFCPLAEKV GNLDTERLNV RKREAVAVHW LQHSLYDVTG | 500 |
SDAHTLWLLQ RLAPKVVTVV EQDLSHAGSF LGRFVEAIHY YSALFDSLGA | 550 |
SYGEESEERH VVEQQLLSKE IRNVLAVGGP SRSGEVKFES WREKMQQCGF | 600 |
KGISLAGNAA TQATLLLGMF PSDGYTLVDD NGTLKLGWKD LSLLTASAWT | 650 |
PRS | 700 |