| Locus |
Common name |
Short description |
| AT3G54320 |
ATWRI1, ASML1, WRI1 |
WRINKLED 1, WRINKLED, ACTIVATOR OF SPO\(MIN\)::LUC1, Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT3G54320.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AclI, AflII, AflIII, AhdI, AlwI, AlwNI, ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglII, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, NaeI, , NarI, NciI, NcoI, NgoMIV, NheI, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SpeI, SphI, SwaI, TliI, Tth111I, XbaI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccII(FnuDII)
| CG|CG |
503, 655, 1051 |
| AccIII(BspMII)
| T|CCGGA |
1077 |
| AciI
| C|CGC |
460, 842 |
| AfeI
| AGC|GCT |
8 |
| AgeI
| A|CCGGT |
692 |
| AluI
| AG|CT |
185, 254, 607, 733, 987, 1080 |
| Aor51HI(Eco47III)
| AGC|GCT |
8 |
| ApoI
| Pu|AATTPy |
264, 384 |
| AvaII
| G|G[AT]CC |
366 |
| BanI
| G|GPyPuCC |
586 |
| BanII
| GPuGCPy|C |
1191 |
| BclI
| T|GATCA |
1041 |
| BfaI
| C|TAG |
207, 513, 804 |
| BglI
| GCCNNNN|NGGC |
117 |
| BsaAI
| PyAC|GTPu |
336, 829 |
| BsaBI
| GATNN|NNATC |
1046 |
| BsaHI
| GPu|CGPyC |
490, 508 |
| BsaJI
| C|CNNGG |
97, 582, 1265 |
| BsaWI
| [AT]|CCGG[AT] |
692, 1077 |
| BsiWI
| C|GTACG |
338 |
| BslI
| CCNNNNN|NNGG |
746 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
1191 |
| BspEI
| T|CCGGA |
1077 |
| BspT107I(HgiCI)
| G|G[TC][AG]CC |
586 |
| BsrFI
| Pu|CCGGPy |
692 |
| BsrI
| ACTGGN| |
223, 362 |
| BstUI
| CG|CG |
503, 655, 1051 |
| BstXI
| CCANNNNN|NTGG |
474 |
| BtsI
| GCAGTGNN| |
475, 924 |
| Cac8I
| GCN|NGC |
990 |
| Cfr10I
| [AG]|CCGG[TC] |
692 |
| DdeI
| C|TNAG |
121 |
| DpnI
| GA-CH3|TC |
341, 547, 965, 1040 |
| DpnII
| |GATC |
341, 547, 965, 1040 |
| EcoO109I
| PuG|GNCCPy |
367 |
| EcoRI
| G|AATTC |
264 |
| Fnu4HI
| GC|NGC |
184, 324, 348, 463, 505, 609, 615, 630, 918, 934 |
| HaeII
| PuGCGC|Py |
8 |
| HaeIII
| GG|CC |
99 |
| HhaI
| GCG|C |
7, 648 |
| HinP1I
| G|CGC |
7, 648 |
| HinfI
| G|ANTC |
202, 229, 269, 942, 1046, 1061, 1233 |
| HpaII
| C|CGG |
389, 691, 1076 |
| Hpy188I
| TCN|GA |
87, 272, 545, 550, 909, 1043, 1308 |
| Hpy99I
| CG[AT]CG| |
180, 509 |
| HpyCH4III
| ACN|GT |
313, 824 |
| HpyCH4IV
| A|CGT |
335, 398, 828 |
| HpyCH4V
| TG|CA |
423, 613, 935 |
| MboI
| |GATC |
341, 547, 965, 1040 |
| MfeI
| C|AATTG |
930 |
| MseI
| T|TAA |
11, 695 |
| MspI
| C|CGG |
389, 691, 1076 |
| MwoI
| GCNNNNN|NNGC |
117, 469, 615 |
| N.BstNBI
| GAGTCNNNN|N |
207 |
| NdeI
| CA|TATG |
308, 620 |
| NlaIII
| CATG| |
625, 1120 |
| NlaIV
| GGN|NCC |
93, 366, 586 |
| NruI
| TCG|CGA |
1052 |
| PpuMI
| PuG|G[AT]CCPy |
367 |
| PstI
| CTGCA|G |
614 |
| RsaI
| GT|AC |
337, 358, 400, 571, 577, 826 |
| Sau3AI
| |GATC |
341, 547, 965, 1040 |
| Sau96I
| G|GNCC |
366 |
| ScaI
| AGT|ACT |
359, 572 |
| SfcI
| C|TPuPyAG |
195, 614 |
| SmlI
| C|TPyPuAG |
355 |
| SnaBI
| TAC|GTA |
336 |
| SspI
| AAT|ATT |
446 |
| StuI
| AGG|CCT |
100 |
| StyI
| C|C[AT][AT]GG |
97 |
| Taqƒ¿I
| T|CGA |
231, 266, 643, 669, 1113, 1125 |
| TfiI
| G|A[AT]TC |
229, 269, 1046, 1061 |
| TseI
| G|C[AT]GC |
184, 324, 348, 609, 615, 630, 918, 934 |
| Tsp45I
| |GT[CG]AC |
204, 432 |
| Tsp509I
| |AATT |
263, 383, 411, 665, 680, 929 |
| TspRI
| NNCA[CG]TGNN| |
316, 475, 924 |
| XcmI
| CCANNNNN|NNNNTGG |
962 |
Click here to view TAIR data
>AT3G54320.1 length:1317
ATGAAGAAGC GCTTAACCAC TTCCACTTGT TCTTCTTCTC CATCTTCCTC | 50 |
TGTTTCTTCT TCTACTACTA CTTCCTCTCC TATTCAGTCG GAGGCTCCAA | 100 |
GGCCTAAACG AGCCAAAAGG GCTAAGAAAT CTTCTCCTTC TGGTGATAAA | 150 |
TCTCATAACC CGACAAGCCC TGCTTCTACC CGACGCAGCT CTATCTACAG | 200 |
AGGAGTCACT AGACATAGAT GGACTGGGAG ATTCGAGGCT CATCTTTGGG | 250 |
ACAAAAGCTC TTGGAATTCG ATTCAGAACA AGAAAGGCAA ACAAGTTTAT | 300 |
CTGGGAGCAT ATGACAGTGA AGAAGCAGCA GCACATACGT ACGATCTGGC | 350 |
TGCTCTCAAG TACTGGGGAC CCGACACCAT CTTGAATTTT CCGGCAGAGA | 400 |
CGTACACAAA GGAATTGGAA GAAATGCAGA GAGTGACAAA GGAAGAATAT | 450 |
TTGGCTTCTC TCCGCCGCCA GAGCAGTGGT TTCTCCAGAG GCGTCTCTAA | 500 |
ATATCGCGGC GTCGCTAGGC ATCACCACAA CGGAAGATGG GAGGCTCGGA | 550 |
TCGGAAGAGT GTTTGGGAAC AAGTACTTGT ACCTCGGCAC CTATAATACG | 600 |
CAGGAGGAAG CTGCTGCAGC ATATGACATG GCTGCGATTG AGTATCGAGG | 650 |
CGCAAACGCG GTTACTAATT TCGACATTAG TAATTACATT GACCGGTTAA | 700 |
AGAAGAAAGG TGTTTTCCCG TTCCCTGTGA ACCAAGCTAA CCATCAAGAG | 750 |
GGTATTCTTG TTGAAGCCAA ACAAGAAGTT GAAACGAGAG AAGCGAAGGA | 800 |
AGAGCCTAGA GAAGAAGTGA AACAACAGTA CGTGGAAGAA CCACCGCAAG | 850 |
AAGAAGAAGA GAAGGAAGAA GAGAAAGCAG AGCAACAAGA AGCAGAGATT | 900 |
GTAGGATATT CAGAAGAAGC AGCAGTGGTC AATTGCTGCA TAGACTCTTC | 950 |
AACCATAATG GAAATGGATC GTTGTGGGGA CAACAATGAG CTGGCTTGGA | 1000 |
ACTTCTGTAT GATGGATACA GGGTTTTCTC CGTTTTTGAC TGATCAGAAT | 1050 |
CTCGCGAATG AGAATCCCAT AGAGTATCCG GAGCTATTCA ATGAGTTAGC | 1100 |
ATTTGAGGAC AACATCGACT TCATGTTCGA TGATGGGAAG CACGAGTGCT | 1150 |
TGAACTTGGA AAATCTGGAT TGTTGCGTGG TGGGAAGAGA GAGCCCACCC | 1200 |
TCTTCTTCTT CACCATTGTC TTGCTTATCT ACTGACTCTG CTTCATCAAC | 1250 |
AACAACAACA ACAACCTCGG TTTCTTGTAA CTATTTGTTT CAGGGCTTGT | 1300 |
TCGTTGGTTC TGAATAA | 1350 |
>AT3G54320.1 longest ORF length:438
MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK | 50 |
SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY | 100 |
LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY | 150 |
LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT | 200 |
QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE | 250 |
GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI | 300 |
VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN | 350 |
LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP | 400 |
SSSSPLSCLS TDSASSTTTT TTSVSCNYLF QGLFVGSE | 450 |
|