| Locus |
Common name |
Short description |
| AT3G54320 |
ATWRI1, ASML1, WRI1 |
WRINKLED 1, WRINKLED, ACTIVATOR OF SPO\(MIN\)::LUC1, Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT3G54320.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstYI, BstZ17I, Bsu36I, BtgI, BtrI, ClaI, DdeI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, N.BstNBI, NaeI, , NarI, NciI, NcoI, NgoMIV, NheI, NotI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SpeI, SphI, StuI, StyI, SwaI, TliI, Tth111I, XbaI, XhoI, XmaI, XmnI
| Name |
Recognition sequence |
Cut positions |
| AccII(FnuDII)
| CG|CG |
281, 433, 829 |
| AccIII(BspMII)
| T|CCGGA |
855 |
| AciI
| C|CGC |
238, 620 |
| AgeI
| A|CCGGT |
470 |
| AluI
| AG|CT |
36, 385, 511, 765, 858 |
| ApoI
| Pu|AATTPy |
46, 162 |
| AvaII
| G|G[AT]CC |
144 |
| BanI
| G|GPyPuCC |
364 |
| BanII
| GPuGCPy|C |
969 |
| BclI
| T|GATCA |
819 |
| BfaI
| C|TAG |
291, 582 |
| BsaAI
| PyAC|GTPu |
114, 607 |
| BsaBI
| GATNN|NNATC |
824 |
| BsaHI
| GPu|CGPyC |
268, 286 |
| BsaJI
| C|CNNGG |
360, 1043 |
| BsaWI
| [AT]|CCGG[AT] |
470, 855 |
| BsiWI
| C|GTACG |
116 |
| BslI
| CCNNNNN|NNGG |
524 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
969 |
| BspEI
| T|CCGGA |
855 |
| BspT107I(HgiCI)
| G|G[TC][AG]CC |
364 |
| BsrFI
| Pu|CCGGPy |
470 |
| BsrI
| ACTGGN| |
5, 140 |
| BstUI
| CG|CG |
281, 433, 829 |
| BstXI
| CCANNNNN|NTGG |
252 |
| BtsI
| GCAGTGNN| |
253, 702 |
| Cac8I
| GCN|NGC |
768 |
| Cfr10I
| [AG]|CCGG[TC] |
470 |
| DpnI
| GA-CH3|TC |
119, 325, 743, 818 |
| DpnII
| |GATC |
119, 325, 743, 818 |
| EcoO109I
| PuG|GNCCPy |
145 |
| EcoRI
| G|AATTC |
46 |
| Fnu4HI
| GC|NGC |
102, 126, 241, 283, 387, 393, 408, 696, 712 |
| HhaI
| GCG|C |
426 |
| HinP1I
| G|CGC |
426 |
| HinfI
| G|ANTC |
11, 51, 720, 824, 839, 1011 |
| HpaII
| C|CGG |
167, 469, 854 |
| Hpy188I
| TCN|GA |
54, 323, 328, 687, 821, 1066 |
| Hpy99I
| CG[AT]CG| |
287 |
| HpyCH4III
| ACN|GT |
91, 602 |
| HpyCH4IV
| A|CGT |
113, 176, 606 |
| HpyCH4V
| TG|CA |
201, 391, 713 |
| MboI
| |GATC |
119, 325, 743, 818 |
| MfeI
| C|AATTG |
708 |
| MseI
| T|TAA |
473 |
| MspI
| C|CGG |
167, 469, 854 |
| MwoI
| GCNNNNN|NNGC |
247, 393 |
| NdeI
| CA|TATG |
86, 398 |
| NlaIII
| CATG| |
403, 898 |
| NlaIV
| GGN|NCC |
144, 364 |
| NruI
| TCG|CGA |
830 |
| PpuMI
| PuG|G[AT]CCPy |
145 |
| PstI
| CTGCA|G |
392 |
| RsaI
| GT|AC |
115, 136, 178, 349, 355, 604 |
| Sau3AI
| |GATC |
119, 325, 743, 818 |
| Sau96I
| G|GNCC |
144 |
| ScaI
| AGT|ACT |
137, 350 |
| SfcI
| C|TPuPyAG |
392 |
| SmlI
| C|TPyPuAG |
133 |
| SnaBI
| TAC|GTA |
114 |
| SspI
| AAT|ATT |
224 |
| Taqƒ¿I
| T|CGA |
13, 48, 79, 421, 447, 891, 903 |
| TfiI
| G|A[AT]TC |
11, 51, 824, 839 |
| TseI
| G|C[AT]GC |
102, 126, 387, 393, 408, 696, 712 |
| Tsp45I
| |GT[CG]AC |
210 |
| Tsp509I
| |AATT |
45, 161, 189, 443, 458, 707 |
| TspRI
| NNCA[CG]TGNN| |
94, 253, 702 |
| XcmI
| CCANNNNN|NNNNTGG |
740 |
Click here to view TAIR data
>AT3G54320.2 length:1071
ATGGACTGGG AGATTCGAGG CTCATCTTTG GGACAAAAGC TCTTGGAATT | 50 |
CGATTCAGAA CAAGAAAGGC AAACAAGGTT TCGAGCATAT GACAGTGAAG | 100 |
AAGCAGCAGC ACATACGTAC GATCTGGCTG CTCTCAAGTA CTGGGGACCC | 150 |
GACACCATCT TGAATTTTCC GGCAGAGACG TACACAAAGG AATTGGAAGA | 200 |
AATGCAGAGA GTGACAAAGG AAGAATATTT GGCTTCTCTC CGCCGCCAGA | 250 |
GCAGTGGTTT CTCCAGAGGC GTCTCTAAAT ATCGCGGCGT CGCTAGGCAT | 300 |
CACCACAACG GAAGATGGGA GGCTCGGATC GGAAGAGTGT TTGGGAACAA | 350 |
GTACTTGTAC CTCGGCACCT ATAATACGCA GGAGGAAGCT GCTGCAGCAT | 400 |
ATGACATGGC TGCGATTGAG TATCGAGGCG CAAACGCGGT TACTAATTTC | 450 |
GACATTAGTA ATTACATTGA CCGGTTAAAG AAGAAAGGTG TTTTCCCGTT | 500 |
CCCTGTGAAC CAAGCTAACC ATCAAGAGGG TATTCTTGTT GAAGCCAAAC | 550 |
AAGAAGTTGA AACGAGAGAA GCGAAGGAAG AGCCTAGAGA AGAAGTGAAA | 600 |
CAACAGTACG TGGAAGAACC ACCGCAAGAA GAAGAAGAGA AGGAAGAAGA | 650 |
GAAAGCAGAG CAACAAGAAG CAGAGATTGT AGGATATTCA GAAGAAGCAG | 700 |
CAGTGGTCAA TTGCTGCATA GACTCTTCAA CCATAATGGA AATGGATCGT | 750 |
TGTGGGGACA ACAATGAGCT GGCTTGGAAC TTCTGTATGA TGGATACAGG | 800 |
GTTTTCTCCG TTTTTGACTG ATCAGAATCT CGCGAATGAG AATCCCATAG | 850 |
AGTATCCGGA GCTATTCAAT GAGTTAGCAT TTGAGGACAA CATCGACTTC | 900 |
ATGTTCGATG ATGGGAAGCA CGAGTGCTTG AACTTGGAAA ATCTGGATTG | 950 |
TTGCGTGGTG GGAAGAGAGA GCCCACCCTC TTCTTCTTCA CCATTGTCTT | 1000 |
GCTTATCTAC TGACTCTGCT TCATCAACAA CAACAACAAC AACCTCGGTT | 1050 |
TCTTGTAACT ATTTGGTCTG A | 1100 |
>AT3G54320.2 longest ORF length:356
MDWEIRGSSL GQKLLEFDSE QERQTRFRAY DSEEAAAHTY DLAALKYWGP | 50 |
DTILNFPAET YTKELEEMQR VTKEEYLASL RRQSSGFSRG VSKYRGVARH | 100 |
HHNGRWEARI GRVFGNKYLY LGTYNTQEEA AAAYDMAAIE YRGANAVTNF | 150 |
DISNYIDRLK KKGVFPFPVN QANHQEGILV EAKQEVETRE AKEEPREEVK | 200 |
QQYVEEPPQE EEEKEEEKAE QQEAEIVGYS EEAAVVNCCI DSSTIMEMDR | 250 |
CGDNNELAWN FCMMDTGFSP FLTDQNLANE NPIEYPELFN ELAFEDNIDF | 300 |
MFDDGKHECL NLENLDCCVV GRESPPSSSS PLSCLSTDSA SSTTTTTTSV | 350 |
SCNYLV | 400 |
|