Locus |
Common name |
Short description |
AT3G54320 |
ATWRI1, ASML1, WRI1 |
WRINKLED 1, WRINKLED, ACTIVATOR OF SPO\(MIN\)::LUC1, Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT3G54320.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
46 |
NdeI
| CA|TATG |
86, 398 |
PstI
| CTGCA|G |
392 |
Click here to view TAIR data
>AT3G54320.2 length:1071
ATGGACTGGG AGATTCGAGG CTCATCTTTG GGACAAAAGC TCTTGGAATT | 50 |
CGATTCAGAA CAAGAAAGGC AAACAAGGTT TCGAGCATAT GACAGTGAAG | 100 |
AAGCAGCAGC ACATACGTAC GATCTGGCTG CTCTCAAGTA CTGGGGACCC | 150 |
GACACCATCT TGAATTTTCC GGCAGAGACG TACACAAAGG AATTGGAAGA | 200 |
AATGCAGAGA GTGACAAAGG AAGAATATTT GGCTTCTCTC CGCCGCCAGA | 250 |
GCAGTGGTTT CTCCAGAGGC GTCTCTAAAT ATCGCGGCGT CGCTAGGCAT | 300 |
CACCACAACG GAAGATGGGA GGCTCGGATC GGAAGAGTGT TTGGGAACAA | 350 |
GTACTTGTAC CTCGGCACCT ATAATACGCA GGAGGAAGCT GCTGCAGCAT | 400 |
ATGACATGGC TGCGATTGAG TATCGAGGCG CAAACGCGGT TACTAATTTC | 450 |
GACATTAGTA ATTACATTGA CCGGTTAAAG AAGAAAGGTG TTTTCCCGTT | 500 |
CCCTGTGAAC CAAGCTAACC ATCAAGAGGG TATTCTTGTT GAAGCCAAAC | 550 |
AAGAAGTTGA AACGAGAGAA GCGAAGGAAG AGCCTAGAGA AGAAGTGAAA | 600 |
CAACAGTACG TGGAAGAACC ACCGCAAGAA GAAGAAGAGA AGGAAGAAGA | 650 |
GAAAGCAGAG CAACAAGAAG CAGAGATTGT AGGATATTCA GAAGAAGCAG | 700 |
CAGTGGTCAA TTGCTGCATA GACTCTTCAA CCATAATGGA AATGGATCGT | 750 |
TGTGGGGACA ACAATGAGCT GGCTTGGAAC TTCTGTATGA TGGATACAGG | 800 |
GTTTTCTCCG TTTTTGACTG ATCAGAATCT CGCGAATGAG AATCCCATAG | 850 |
AGTATCCGGA GCTATTCAAT GAGTTAGCAT TTGAGGACAA CATCGACTTC | 900 |
ATGTTCGATG ATGGGAAGCA CGAGTGCTTG AACTTGGAAA ATCTGGATTG | 950 |
TTGCGTGGTG GGAAGAGAGA GCCCACCCTC TTCTTCTTCA CCATTGTCTT | 1000 |
GCTTATCTAC TGACTCTGCT TCATCAACAA CAACAACAAC AACCTCGGTT | 1050 |
TCTTGTAACT ATTTGGTCTG A | 1100 |
>AT3G54320.2 longest ORF length:356
MDWEIRGSSL GQKLLEFDSE QERQTRFRAY DSEEAAAHTY DLAALKYWGP | 50 |
DTILNFPAET YTKELEEMQR VTKEEYLASL RRQSSGFSRG VSKYRGVARH | 100 |
HHNGRWEARI GRVFGNKYLY LGTYNTQEEA AAAYDMAAIE YRGANAVTNF | 150 |
DISNYIDRLK KKGVFPFPVN QANHQEGILV EAKQEVETRE AKEEPREEVK | 200 |
QQYVEEPPQE EEEKEEEKAE QQEAEIVGYS EEAAVVNCCI DSSTIMEMDR | 250 |
CGDNNELAWN FCMMDTGFSP FLTDQNLANE NPIEYPELFN ELAFEDNIDF | 300 |
MFDDGKHECL NLENLDCCVV GRESPPSSSS PLSCLSTDSA SSTTTTTTSV | 350 |
SCNYLV | 400 |
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