|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT3G54320 | ATWRI1, ASML1, WRI1 | WRINKLED 1, WRINKLED, ACTIVATOR OF SPO\(MIN\)::LUC1, Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT3G54320.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| EcoRI | G|AATTC | 264 |
| NdeI | CA|TATG | 308, 620 |
| PstI | CTGCA|G | 614 |
| StyI | C|C[AT][AT]GG | 97 |
Click here to view TAIR data
>AT3G54320.3 length:1293
ATGAAGAAGC GCTTAACCAC TTCCACTTGT TCTTCTTCTC CATCTTCCTC | 50 |
TGTTTCTTCT TCTACTACTA CTTCCTCTCC TATTCAGTCG GAGGCTCCAA | 100 |
GGCCTAAACG AGCCAAAAGG GCTAAGAAAT CTTCTCCTTC TGGTGATAAA | 150 |
TCTCATAACC CGACAAGCCC TGCTTCTACC CGACGCAGCT CTATCTACAG | 200 |
AGGAGTCACT AGACATAGAT GGACTGGGAG ATTCGAGGCT CATCTTTGGG | 250 |
ACAAAAGCTC TTGGAATTCG ATTCAGAACA AGAAAGGCAA ACAAGTTTAT | 300 |
CTGGGAGCAT ATGACAGTGA AGAAGCAGCA GCACATACGT ACGATCTGGC | 350 |
TGCTCTCAAG TACTGGGGAC CCGACACCAT CTTGAATTTT CCGGCAGAGA | 400 |
CGTACACAAA GGAATTGGAA GAAATGCAGA GAGTGACAAA GGAAGAATAT | 450 |
TTGGCTTCTC TCCGCCGCCA GAGCAGTGGT TTCTCCAGAG GCGTCTCTAA | 500 |
ATATCGCGGC GTCGCTAGGC ATCACCACAA CGGAAGATGG GAGGCTCGGA | 550 |
TCGGAAGAGT GTTTGGGAAC AAGTACTTGT ACCTCGGCAC CTATAATACG | 600 |
CAGGAGGAAG CTGCTGCAGC ATATGACATG GCTGCGATTG AGTATCGAGG | 650 |
CGCAAACGCG GTTACTAATT TCGACATTAG TAATTACATT GACCGGTTAA | 700 |
AGAAGAAAGG TGTTTTCCCG TTCCCTGTGA ACCAAGCTAA CCATCAAGAG | 750 |
GGTATTCTTG TTGAAGCCAA ACAAGAAGTT GAAACGAGAG AAGCGAAGGA | 800 |
AGAGCCTAGA GAAGAAGTGA AACAACAGTA CGTGGAAGAA CCACCGCAAG | 850 |
AAGAAGAAGA GAAGGAAGAA GAGAAAGCAG AGCAACAAGA AGCAGAGATT | 900 |
GTAGGATATT CAGAAGAAGC AGCAGTGGTC AATTGCTGCA TAGACTCTTC | 950 |
AACCATAATG GAAATGGATC GTTGTGGGGA CAACAATGAG CTGGCTTGGA | 1000 |
ACTTCTGTAT GATGGATACA GGGTTTTCTC CGTTTTTGAC TGATCAGAAT | 1050 |
CTCGCGAATG AGAATCCCAT AGAGTATCCG GAGCTATTCA ATGAGTTAGC | 1100 |
ATTTGAGGAC AACATCGACT TCATGTTCGA TGATGGGAAG CACGAGTGCT | 1150 |
TGAACTTGGA AAATCTGGAT TGTTGCGTGG TGGGAAGAGA GAGCCCACCC | 1200 |
TCTTCTTCTT CACCATTGTC TTGCTTATCT ACTGACTCTG CTTCATCAAC | 1250 |
AACAACAACA ACAACCTCGG TTTCTTGTAA CTATTTGGTC TGA | 1300 |
>AT3G54320.3 longest ORF length:430
MKKRLTTSTC SSSPSSSVSS STTTSSPIQS EAPRPKRAKR AKKSSPSGDK | 50 |
SHNPTSPAST RRSSIYRGVT RHRWTGRFEA HLWDKSSWNS IQNKKGKQVY | 100 |
LGAYDSEEAA AHTYDLAALK YWGPDTILNF PAETYTKELE EMQRVTKEEY | 150 |
LASLRRQSSG FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYNT | 200 |
QEEAAAAYDM AAIEYRGANA VTNFDISNYI DRLKKKGVFP FPVNQANHQE | 250 |
GILVEAKQEV ETREAKEEPR EEVKQQYVEE PPQEEEEKEE EKAEQQEAEI | 300 |
VGYSEEAAVV NCCIDSSTIM EMDRCGDNNE LAWNFCMMDT GFSPFLTDQN | 350 |
LANENPIEYP ELFNELAFED NIDFMFDDGK HECLNLENLD CCVVGRESPP | 400 |
SSSSPLSCLS TDSASSTTTT TTSVSCNYLV | 450 |