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| Locus | Common name | Short description |
| AT3G54350 | EMB1967 | embryo defective 1967, Forkhead-associated (FHA) domain-containing protein (.1), Forkhead-associated (FHA) domain-containing protein (.2), Forkhead-associated (FHA) domain-containing protein (.3) |
>AT3G54350.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 984 |
| KpnI | GGTAC|C | 1327 |
| NcoI | C|CATGG | 1392 |
| NheI | G|CTAGC | 670 |
| SpeI | A|CTAGT | 1246 |
| StyI | C|C[AT][AT]GG | 362, 1392 |
| XbaI | T|CTAGA | 115 |
Click here to view TAIR data
>AT3G54350.2 length:2109
ATGGGGGCTC TTGCTCAAGT TGTTCCGTGG ATACCCGAAG ACGACCTGCT | 50 |
GCTAAAGAAT GCTGTCGAGG CTGGTGCTTC TTTGGAATCG CTTGCTAAAG | 100 |
GTGCTGTGCA GTTTTCTAGA AGATTTTCTA TTAGAGAATT GCAAGATCGA | 150 |
TGGCATGCAC TGCTTTATGA TCCAGTAGTT TCTGTAGAGG CGGCTTTTCG | 200 |
GATGGCTGAG CTTGAACGTA CTAACCCTAA TTTTCCTACT AAGTTTGGTA | 250 |
GAACTGGATA TTCAAAAGAA AACAAAAGTT CATCTAGGAA GAGGAATGCT | 300 |
GAAAGGCTCA GAAGTACTTA TCATTCCTTG CGGAAGAAAT TTAGGACTGA | 350 |
GCCATTCAAT TCCTTGGATC TAGGTTTCCT CGTTCCACCA AATGATAGCC | 400 |
ATTTCATGGA TAATGGTGAT GCAACACATC TTGGTCTTGA GGACTCTCAC | 450 |
ATGGATATTA TCCACAACGC GTTTCCAGAA ATCTTGGCTG AAGGTGGTTG | 500 |
CGTGACAACT CATGTTCTGC CAGAAGATAA TTTACAGGGA GACATTCCTT | 550 |
ACGTAGAAGG AGAAAATCTC ACATTCACTG AACACGCAGG TCTATCAGTA | 600 |
TGTGATGTGG TTCATCAAGA TTCCGAGCAG AAACTAGAGA ATACTGCTCA | 650 |
CGAGGCAAAA AACACAATGG CTAGCACTGA TTTCCTGGCA CAGCTTTCAA | 700 |
CTTCTCTTTT CGAAGAAGAC ATGGAACCGT TCATGGAAGT AGATGGCAAA | 750 |
GAAGTTGACA AGTCATATTA TGATGGTCTT AGCTCACTGT TGGTGAACTC | 800 |
TACAAATGAT ACAAACCGCG AGGCTTTTCC TAACCCCACC GAGCAAGAAC | 850 |
CTTCCATTGC ACCAACTCAT CCAGGAGAGG CAACCCTGGA TGATCATGTG | 900 |
ATGCTTGAGC TAGATGGTAC AATCGCTTTA GATCCTCATC CTGAGATTGT | 950 |
TGGGGGTGTA ATCTGCTGTT TATTAAACGA AGAGGATCCT GATATTCCGT | 1000 |
GTAATGATGA CATTTTCCTG TCCAACAACT CCCGTCCGAT GTCAGTTTCT | 1050 |
TCTTTAGCCC GGCGGAACTT TAAGGATACC AATAGTCCAA TAACTACATG | 1100 |
TGTAAGAGAC GTCTCCGCCA GTAAGGAAAA AAGTGAGGGA TATTCACTCC | 1150 |
AGGCTCAAAA GAAAAAACCA GGACGTTTAC AGGGGTCTAC TCAAGGAAAG | 1200 |
CCAGAGATGG GCCAACCAAG TAAAGGTAGC AAATTCAGGG CATCGACTAG | 1250 |
TACTGAGTTA AAGAATACTG TAGCTCCTGG TGGTTCTTCC TCTGCACAGG | 1300 |
CTTGCTCTAA TACTCTACTT TCTACTGGTA CCGGTGCAAA AGATGGAAAG | 1350 |
AAAGAAACTG CTACTGGAAC ACTCTTTGTC GGATCTGATG GCCATGGCAA | 1400 |
CCACCCAGAG AAGGATAGTG AAAATTGTAA AGAGAAAAAT GTTGTACCAC | 1450 |
CTGTTAATGA ATCGCCACAT GCTAAAGATA CTGATGATGG CTTGATAGAG | 1500 |
ATTACAGTCC CTGAGCTGGA GATCACCCGT GCAGAAGCAG AAGCAGAAGC | 1550 |
AGAAGCGCAT GTTTGTGAGA GTGATGAGGA CTTACCCAAT TATTCTGACA | 1600 |
TTGAGGCTAT GATACTTGAC ATGGACTTGG AACCTGATGA TCAAGATAAT | 1650 |
TTTGATCTCG AAGTCTCCAA GTATCAGAGC CAAGACATGA AAAGAACAAT | 1700 |
CATAAGACTT GAGCAGGCTG CTCATTCATA TATGCAAAGA GCCATTGCTT | 1750 |
CCCGTGGTGC ATTCGCTGTT TTATATGGCA GATATTCAAA ACACTATATC | 1800 |
AAGAAGCCTG AGGTTTTGGT GGGTAGATCA ACAGAAGACC TCGCTGTGGA | 1850 |
CATTGATTTG GGAAGAGAAA AGCGGGGTAG CAAAATATCT CGACGACAGG | 1900 |
CGATCATACG GCTGGGTGAT GACGGTTCGT TTCATATAAA AAACCTGGGG | 1950 |
AAGTATTCAA TCTCAGTAAA TGAGAAGGAA GTAGATCCTG GACAGAGTTT | 2000 |
AATCCTCAAA TCCGATTGTC TAGTTGAGAT ACGGGGAATG CCTTTTATAT | 2050 |
TTGAAACAAA CCAAAGTTGC ATGCAAGAGT ACCTGAAGAG AAGAGGGAAA | 2100 |
GTGAACTGA | 2150 |
>AT3G54350.2 longest ORF length:702
MGALAQVVPW IPEDDLLLKN AVEAGASLES LAKGAVQFSR RFSIRELQDR | 50 |
WHALLYDPVV SVEAAFRMAE LERTNPNFPT KFGRTGYSKE NKSSSRKRNA | 100 |
ERLRSTYHSL RKKFRTEPFN SLDLGFLVPP NDSHFMDNGD ATHLGLEDSH | 150 |
MDIIHNAFPE ILAEGGCVTT HVLPEDNLQG DIPYVEGENL TFTEHAGLSV | 200 |
CDVVHQDSEQ KLENTAHEAK NTMASTDFLA QLSTSLFEED MEPFMEVDGK | 250 |
EVDKSYYDGL SSLLVNSTND TNREAFPNPT EQEPSIAPTH PGEATLDDHV | 300 |
MLELDGTIAL DPHPEIVGGV ICCLLNEEDP DIPCNDDIFL SNNSRPMSVS | 350 |
SLARRNFKDT NSPITTCVRD VSASKEKSEG YSLQAQKKKP GRLQGSTQGK | 400 |
PEMGQPSKGS KFRASTSTEL KNTVAPGGSS SAQACSNTLL STGTGAKDGK | 450 |
KETATGTLFV GSDGHGNHPE KDSENCKEKN VVPPVNESPH AKDTDDGLIE | 500 |
ITVPELEITR AEAEAEAEAH VCESDEDLPN YSDIEAMILD MDLEPDDQDN | 550 |
FDLEVSKYQS QDMKRTIIRL EQAAHSYMQR AIASRGAFAV LYGRYSKHYI | 600 |
KKPEVLVGRS TEDLAVDIDL GREKRGSKIS RRQAIIRLGD DGSFHIKNLG | 650 |
KYSISVNEKE VDPGQSLILK SDCLVEIRGM PFIFETNQSC MQEYLKRRGK | 700 |
VN | 750 |