fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G54620 BZO2H4, ATBZIP25 BASIC LEUCINE ZIPPER O2 HOMOLOG 4, ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25, basic leucine zipper 25 (.1.2.3)

>AT3G54620.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PstI, SacI, SalI, SmaI, StyI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 869
EcoRV GAT|ATC 883
NheI G|CTAGC 493
PacI TTAAT|TAA 813
PvuII CAG|CTG 851
SpeI A|CTAGT 613
XhoI C|TCGAG 424


Click here to view TAIR data

>AT3G54620.1 length:1212
ATGCACATCG TCTTCTCTGT CGATGATTTG ACCGAATCCT TCTGGCCTGT 
50
TCCCGCTCCG GCGCCGTCGC CGGGATCGTC ATCGACTCCG TCACCGACGC 
100
AGAACGTGGC GGATGGGATG ACTCGAAGTC AATCGGAGTG GGCGTTCCAC 
150
AGGCTTATCA ATGAGTTGTC TGGTTCCGAT TCGAGCCCTA CGACTAACAC 
200
AATCGAGAGA TCACCTCCAC CGGTTCAGTC TCTTTCGAGA TTAGAAGAAA 
250
CCGTTGACGA AACCGAAGAT GTTGTTGAGA TTCAGAAACC GCAGAATCAT 
300
CGACGGCTCC CTGTTGATGA TCAAGGGAAG AATCGGAATC GTGCTCCGTC 
350
GTCTGATCCG GTTGATTCTT CAGCTCCTGT TGTTGTTGAT CCTAATCAGT 
400
ATCATGCGAT TCTTAAGAGC AAGCTCGAGC TTGCTTGCGC TGCTGTTGCT 
450
CGTCGTGTGG GAACTGTGAA ACCGGAAGAT TCGAGTGCTT CAGCTAGCAA 
500
TCAAAAACAA GCTCAAGGCT CCATTGTGGC ACAAACCTCA CCTGGTGCTT 
550
CATCTGTTAG ATTTTCTCCC ACAACAAGCA CGCAAAAGAA ACCTGATGTT 
600
CCAGCCAGAC AAACTAGTAT TTCATCACGA GATGATTCTG ATGACGATGA 
650
TCTTGATGGA GACGCAGATA ATGGAGATCC TACTGATGTG AAGCGTGCTA 
700
GGAGGATGCT CTCAAACCGA GAATCCGCTA GGCGCTCTAG GAGAAGAAAG 
750
CAAGAACAAA TGAATGAATT TGATACACAG GTAGGCCAAT TAAGAGCCGA 
800
GCATTCAACT TTAATTAATC GTCTTAGTGA CATGAATCAT AAGTATGATG 
850
CAGCTGCTGT TGACAACAGA ATTCTAAGAG CTGATATCGA AACTTTGAGA 
900
ACAAAGGTTA AGATGGCAGA GGAAACTGTG AAAAGAGTGA CAGGAGTGAA 
950
CCCTTTGCAT TGGTCAAGAC CAAACATGGG CATACCATTC AGCAACACAC 
1000
CGAGTGCTTC CTCTAGTATT CCGCCAAACT CTAACCACAT TTTGAAACCA 
1050
GCAAATTCAA GTACCAACAC CAGTGCTGGT TTAGCACAAA ATCAGAGAGT 
1100
GGAGACGGCA AATTTCTTGC CGGAACAGGT GAACCGTGAA GGCATGCAGA 
1150
ATCCATTTGC TCCTGATTCT AATCTGTATG AAACCCTACC CCATTGGAAT 
1200
CACAAGCATT AA
1250

>AT3G54620.1 longest ORF length:403
MHIVFSVDDL TESFWPVPAP APSPGSSSTP SPTQNVADGM TRSQSEWAFH 
50
RLINELSGSD SSPTTNTIER SPPPVQSLSR LEETVDETED VVEIQKPQNH 
100
RRLPVDDQGK NRNRAPSSDP VDSSAPVVVD PNQYHAILKS KLELACAAVA 
150
RRVGTVKPED SSASASNQKQ AQGSIVAQTS PGASSVRFSP TTSTQKKPDV 
200
PARQTSISSR DDSDDDDLDG DADNGDPTDV KRARRMLSNR ESARRSRRRK 
250
QEQMNEFDTQ VGQLRAEHST LINRLSDMNH KYDAAAVDNR ILRADIETLR 
300
TKVKMAEETV KRVTGVNPLH WSRPNMGIPF SNTPSASSSI PPNSNHILKP 
350
ANSSTNTSAG LAQNQRVETA NFLPEQVNRE GMQNPFAPDS NLYETLPHWN 
400
HKH
450