fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G55370 OBP3, AtDof3. 6 OBF-binding protein 3 (.1.2.3)

>AT3G55370.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 171
SpeI A|CTAGT 439
StyI C|C[AT][AT]GG 555


Click here to view TAIR data

>AT3G55370.1 length:972
ATGGTTTTCT CATCTCTTCC AGTGAATCAG TTCGATTCCC AAAATTGGCA 
50
GCAGCAAGGG AACCAACATC AGCTAGAATG TGTCACAACT GACCAGAACC 
100
CTAATAATTA CTTACGGCAG CTCTCATCAC CACCGACTTC TCAGGTTGCA 
150
GGTTCGAGTC AAGCTAGAGT GAATTCAATG GTGGAACGTG CTCGGATCGC 
200
AAAAGTCCCA TTGCCTGAAG CAGCTCTAAA TTGCCCTAGA TGTGACTCAA 
250
CCAATACTAA GTTCTGTTAC TTCAATAACT ATAGCCTTAC TCAACCTCGC 
300
CATTTCTGCA AAACATGTCG TCGCTATTGG ACACGTGGCG GTTCCTTGAG 
350
GAATGTTCCT GTTGGAGGAG GCTTTAGGAG GAACAAGAGA AGCAAATCCA 
400
GATCGAAATC TACGGTCGTG GTCTCGACTG ATAATACTAC TAGTACTTCA 
450
TCACTTACTT CTCGCCCAAG TTACTCAAAC CCTAGCAAGT TTCATAGCTA 
500
CGGTCAAATC CCGGAGTTTA ATTCCAACTT GCCCATCTTG CCTCCTCTCC 
550
AAAGCCTTGG AGATTACAAT TCAAGCAACA CTGGATTAGA TTTTGGTGGA 
600
ACTCAAATAA GCAACATGAT AAGTGGTATG AGTTCTAGTG GTGGGATCTT 
650
GGATGCATGG AGAATACCTC CATCACAACA AGCTCAGCAA TTCCCTTTCT 
700
TGATCAACAC TACCGGATTG GTGCAATCTT CAAACGCGTT ATATCCATTA 
750
CTAGAAGGCG GGGTTAGCGC CACGCAAACA AGAAATGTGA AGGCGGAAGA 
800
GAATGATCAG GATCGGGGTA GGGATGGGGA TGGAGTGAAT AACTTATCAA 
850
GAAACTTTTT GGGTAATATC AACATAAACT CAGGCAGGAA CGAGGAATAC 
900
ACATCATGGG GAGGTAACAG TTCTTGGACC GGTTTCACCT CCAACAACTC 
950
AACAGGCCAT CTCTCATTCT AA
1000

>AT3G55370.1 longest ORF length:323
MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA 
50
GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR 
100
HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS 
150
SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG 
200
TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL 
250
LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY 
300
TSWGGNSSWT GFTSNNSTGH LSF
350