Locus |
Common name |
Short description |
AT3G55370 |
OBP3, AtDof3. 6 |
OBF-binding protein 3 (.1.2.3) |
>AT3G55370.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
171 |
SpeI
| A|CTAGT |
439 |
StyI
| C|C[AT][AT]GG |
555 |
Click here to view TAIR data
>AT3G55370.1 length:972
ATGGTTTTCT CATCTCTTCC AGTGAATCAG TTCGATTCCC AAAATTGGCA | 50 |
GCAGCAAGGG AACCAACATC AGCTAGAATG TGTCACAACT GACCAGAACC | 100 |
CTAATAATTA CTTACGGCAG CTCTCATCAC CACCGACTTC TCAGGTTGCA | 150 |
GGTTCGAGTC AAGCTAGAGT GAATTCAATG GTGGAACGTG CTCGGATCGC | 200 |
AAAAGTCCCA TTGCCTGAAG CAGCTCTAAA TTGCCCTAGA TGTGACTCAA | 250 |
CCAATACTAA GTTCTGTTAC TTCAATAACT ATAGCCTTAC TCAACCTCGC | 300 |
CATTTCTGCA AAACATGTCG TCGCTATTGG ACACGTGGCG GTTCCTTGAG | 350 |
GAATGTTCCT GTTGGAGGAG GCTTTAGGAG GAACAAGAGA AGCAAATCCA | 400 |
GATCGAAATC TACGGTCGTG GTCTCGACTG ATAATACTAC TAGTACTTCA | 450 |
TCACTTACTT CTCGCCCAAG TTACTCAAAC CCTAGCAAGT TTCATAGCTA | 500 |
CGGTCAAATC CCGGAGTTTA ATTCCAACTT GCCCATCTTG CCTCCTCTCC | 550 |
AAAGCCTTGG AGATTACAAT TCAAGCAACA CTGGATTAGA TTTTGGTGGA | 600 |
ACTCAAATAA GCAACATGAT AAGTGGTATG AGTTCTAGTG GTGGGATCTT | 650 |
GGATGCATGG AGAATACCTC CATCACAACA AGCTCAGCAA TTCCCTTTCT | 700 |
TGATCAACAC TACCGGATTG GTGCAATCTT CAAACGCGTT ATATCCATTA | 750 |
CTAGAAGGCG GGGTTAGCGC CACGCAAACA AGAAATGTGA AGGCGGAAGA | 800 |
GAATGATCAG GATCGGGGTA GGGATGGGGA TGGAGTGAAT AACTTATCAA | 850 |
GAAACTTTTT GGGTAATATC AACATAAACT CAGGCAGGAA CGAGGAATAC | 900 |
ACATCATGGG GAGGTAACAG TTCTTGGACC GGTTTCACCT CCAACAACTC | 950 |
AACAGGCCAT CTCTCATTCT AA | 1000 |
>AT3G55370.1 longest ORF length:323
MVFSSLPVNQ FDSQNWQQQG NQHQLECVTT DQNPNNYLRQ LSSPPTSQVA | 50 |
GSSQARVNSM VERARIAKVP LPEAALNCPR CDSTNTKFCY FNNYSLTQPR | 100 |
HFCKTCRRYW TRGGSLRNVP VGGGFRRNKR SKSRSKSTVV VSTDNTTSTS | 150 |
SLTSRPSYSN PSKFHSYGQI PEFNSNLPIL PPLQSLGDYN SSNTGLDFGG | 200 |
TQISNMISGM SSSGGILDAW RIPPSQQAQQ FPFLINTTGL VQSSNALYPL | 250 |
LEGGVSATQT RNVKAEENDQ DRGRDGDGVN NLSRNFLGNI NINSGRNEEY | 300 |
TSWGGNSSWT GFTSNNSTGH LSF | 350 |
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