fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G55770 WLIM2b WLIM2b, GATA type zinc finger transcription factor family protein (.1.2.3.4.5.6.7)

>AT3G55770.6 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 86
PvuII CAG|CTG 133


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>AT3G55770.6 length:384
ATGTCTTTTA CAGGAACTCA ACAGAAATGC AAGGCTTGTG AGAAGACTGT 
50
TTATGCTGTT GAGCTTCTCT CTGCTGATGG AGTTGGATAT CACAAGTCTT 
100
GCTTCAAATG CACTCACTGC AAAAGCAGGC TTCAGCTGAG TAGTTACTCA 
150
TCAATGGAAG GTGTTTTGTA CTGTAAGCCT CATTTTGAGC AGCTCTTTAA 
200
GGAGAGTGGT AGTTTCAACA AGAACTTTCA GTCACCTGCA AAATCGGCTG 
250
ACAAATCAAC TCCTGAGCTG ACAAGGACGC CTAGCCGAGT TGCTGGCAGG 
300
TTCTCTGGTA CACAAGAGAA ATGCGCCACT TGTAGTAAAA CTGTGTATCC 
350
TATTGAAAAG GTCTATGTTG GAGTATTACT CTAA
400

>AT3G55770.6 longest ORF length:127
MSFTGTQQKC KACEKTVYAV ELLSADGVGY HKSCFKCTHC KSRLQLSSYS 
50
SMEGVLYCKP HFEQLFKESG SFNKNFQSPA KSADKSTPEL TRTPSRVAGR 
100
FSGTQEKCAT CSKTVYPIEK VYVGVLL
150