fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G56220 transcription regulators (.1)

>AT3G56220.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 306
HindIII A|AGCTT 127


Click here to view TAIR data

>AT3G56220.1 length:471
ATGGTTTCGA GAGAACACAA GAGAGGTTCC TCTCTGCGTG AGAAGTTTCA 
50
TTTGCTTCGT TCAATCACTG ATTCTCATGC TGAGAGCGAA ACATCTATCA 
100
TAGTGGATGC ATCAAAATAT ATCAAAAAGC TTAAGCAGAA GGTAGAAAAA 
150
ATCAACAATG CGACCACGTC TGAGCAATCT TTCCGTGAAT CTTCCGATCC 
200
AAATCCTATG GTTACAGTGG AAACCCTAGA GAAGGGGTTC ATGATAAAGG 
250
TAATGTCAAG GAAGAATGAG GCAGGCATGT TGGTTTGTGT TCTTGAAACC 
300
TTTGAAGATC TTGGACTTGA TGTTGTTGAA GCTAGGGTTT CATGTACTGA 
350
CACATTTAGC TTGCATGCCA TTGGTTCATC AAATAATGAT GATGGAGACT 
400
GCATAGATGC TGAAGCAGTG AAACAGGCAG TGGCAGAAGC AATAAGGACC 
450
TGGAGTGATA GCCATGCATG A
500

>AT3G56220.1 longest ORF length:156
MVSREHKRGS SLREKFHLLR SITDSHAESE TSIIVDASKY IKKLKQKVEK 
50
INNATTSEQS FRESSDPNPM VTVETLEKGF MIKVMSRKNE AGMLVCVLET 
100
FEDLGLDVVE ARVSCTDTFS LHAIGSSNND DGDCIDAEAV KQAVAEAIRT 
150
WSDSHA
200