fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT3G56660 BZIP49 basic region/leucine zipper motif protein 49 (.1)

>AT3G56660.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 1135
HpaI GTT|AAC 277
NcoI C|CATGG 742
SpeI A|CTAGT 373, 534
StyI C|C[AT][AT]GG 742, 1291
XbaI T|CTAGA 976


Click here to view TAIR data

>AT3G56660.1 length:1863
ATGGCGGAAC CAGTTTTGGA GGACACTTAT CTTACTTTCT CTTCCGATTT 
50
CGATTACATC GCGATCGCTC CTTCTCCCTT TGATAATTTC TGCAATTCTA 
100
ACTCTGATCA AGTTCGGAAC TCGATCTCTG ATCTGAGGTT TTTGATTGAC 
150
GACGACGACA GTTTCGACGA TCTCTACTTC CCTTCTGAGA ACGAATCGTT 
200
CTGCATTCCT CCTGACGCTA CGAAACGAGA AATGTCTGGT GACTTTACGC 
250
CGGCGTCGGG AATTTCAGGC GATTGTGTTA ACGAAGACAC GGAGAAGAAT 
300
ACGAATGGCG TGTTAATATC TACTTCAAGC TGCTACAATA GAGAATCACC 
350
TACGGATTCT GATTTCTCCG GTACTAGTCA GAGCTTGAGT TTTTCGGGGC 
400
AAGATTCTGC CAAGAGGAAA ACAGAGATTG AAGAAGATTC AAGCGACGAA 
450
TCCAGGAGAT TGGGTAAAGA TGGTTTTGCA AGTGTTATAA AAGTTGGTGG 
500
TGAAGAAGAT GATGAGAAGA AGAAGAACGT GAGACTAGTT AGAAACCGTG 
550
AAAGTGCTCA CCTTTCAAGA CAGAGGAAGA AGCATTACGT GGAGGAGCTT 
600
GAAGATAAAG TTAAGAATAT GCATTCCACT ATATCGGAAT TGAGCAGTAA 
650
GATGTCTTAT TTCGTGGCTG AGAATGTCAC TTTGAGGCAA CAGATGGGCA 
700
CAAGGTTCTC AAGTGGACCA CCGATGGTTC CAATTGTTTA TCCATGGATG 
750
CAGTATCCGG CTTATATGGT TAAACCACAA GGTTCTCAAG TGGCTTTGCT 
800
TCCTATTCCT CGGTTGAAAC CAAAACATTC TGTTGCTAAG GTGAAGAAGT 
850
TCAAGAAGGT TGCTAGTTTT AGTGTTTTTG GTTTTCTGTT TTGTATGTTT 
900
TTGTTTGGTG CATTGGTGAA CATTAGCTAT GGGGAGTATA AGTCTAACTA 
950
TGTTACTGAC GGGGTTTATG ATCAGTCTAG AGGAAGAGTT TTGGTTGTTG 
1000
ATAGTAGTAG AGTACATTGT GGGGGAGATT CTGATCAAGG AGTGGGAAGA 
1050
AACGTATCTG AAACAGAGAA TTTGGGGCCT CCTCGAAATA GTAGTGAACC 
1100
TCTAGTTGCA TCGCTATTTG TTCCGAGGAA TGAAAAGCTT GTCAAGATCG 
1150
ATGGAAATTT GATTATTCAT TCTGTTTTGG CGAGCGAGAA AGCCAGGGAT 
1200
TCTGAAACAA AGAACGAAGA AGGGAAAAGT GTTCTAGCAA CTACAACTAA 
1250
AACTTTATCT CCTGCATTGC CTTTACCTGA CTCCACAAGC CCAAGGACCA 
1300
GGGATGTGTC TAAGCACCTC TATAGCGAAA CGGGGAAAGG CCTGTCATCT 
1350
TCTGGTTCTG ATGATGCTTC GAACGACCAA CTCAAATCAA CAATAGCCAA 
1400
TGGTAAAATG CAGCAATGGT TTCGTGAAGG TGTTGCAGGG CCAATGTTCA 
1450
GTTCGGGGAT GTGCACTGAA GTGTTTCAGT TTGATGTCTC CTCAAACTCA 
1500
GGAGCCATCA TTCCTGCTTC TCCACATACT CAACAGTGTA AGAACACCAG 
1550
TGATACACAA AAGGGGAAAA AGAACAGAAG AATCCTCAGT GGTGGTCTTC 
1600
CGGTATCTGA CTTTAATCTT ACCAAAGAAG ATCATAACAG CTCTAGCAAA 
1650
GACAAGTTCC GGGAAACCAA GCCAGGCCCA TCAATGGTAG TGTCTGTGCT 
1700
TGTTGATCCC AGAGAAGGCG GTAATGGAGA CATCGATGGG ATGATGGGAG 
1750
GAACAAAACC ACAGTCCCGA GTTTTCATAG TCGTGCTTGT GGACGGTGTG 
1800
AAGTATATAA CATACTCTTG CGTTCTTCCA CGACCAGATG TCCCTCATCT 
1850
CATGACCAGT TGA
1900

>AT3G56660.1 longest ORF length:620
MAEPVLEDTY LTFSSDFDYI AIAPSPFDNF CNSNSDQVRN SISDLRFLID 
50
DDDSFDDLYF PSENESFCIP PDATKREMSG DFTPASGISG DCVNEDTEKN 
100
TNGVLISTSS CYNRESPTDS DFSGTSQSLS FSGQDSAKRK TEIEEDSSDE 
150
SRRLGKDGFA SVIKVGGEED DEKKKNVRLV RNRESAHLSR QRKKHYVEEL 
200
EDKVKNMHST ISELSSKMSY FVAENVTLRQ QMGTRFSSGP PMVPIVYPWM 
250
QYPAYMVKPQ GSQVALLPIP RLKPKHSVAK VKKFKKVASF SVFGFLFCMF 
300
LFGALVNISY GEYKSNYVTD GVYDQSRGRV LVVDSSRVHC GGDSDQGVGR 
350
NVSETENLGP PRNSSEPLVA SLFVPRNEKL VKIDGNLIIH SVLASEKARD 
400
SETKNEEGKS VLATTTKTLS PALPLPDSTS PRTRDVSKHL YSETGKGLSS 
450
SGSDDASNDQ LKSTIANGKM QQWFREGVAG PMFSSGMCTE VFQFDVSSNS 
500
GAIIPASPHT QQCKNTSDTQ KGKKNRRILS GGLPVSDFNL TKEDHNSSSK 
550
DKFRETKPGP SMVVSVLVDP REGGNGDIDG MMGGTKPQSR VFIVVLVDGV 
600
KYITYSCVLP RPDVPHLMTS 
650